RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
PMS1-202ENST00000374826 ASB11Q8WXH4 323 aa7.85□□□□□ -1.15
PMS1-202ENST00000374826 CACNA2D2Q9NY47 1150 aa7.85□□□□□ -1.15
PMS1-202ENST00000374826 AKAP2Q9Y2D5 859 aa7.85□□□□□ -1.15
PMS1-202ENST00000374826 ZNF252P-AS1Q0IIN9 211 aa7.84□□□□□ -1.15
PMS1-202ENST00000374826 LCE4AQ5TA78 99 aa7.84□□□□□ -1.15
PMS1-202ENST00000374826 FAM84AQ96KN4 292 aa7.84□□□□□ -1.15
PMS1-202ENST00000374826 SLC38A3Q99624 504 aa7.84□□□□□ -1.15
PMS1-202ENST00000374826 PRDM7Q9NQW5 492 aa7.84□□□□□ -1.15
PMS1-202ENST00000374826 GTF2IRD1Q9UHL9 959 aa7.84□□□□□ -1.15
PMS1-202ENST00000374826 SPOCD1Q6ZMY3 1216 aa7.83□□□□□ -1.16
PMS1-202ENST00000374826 PRDM10Q9NQV6 1147 aa7.83□□□□□ -1.16
PMS1-202ENST00000374826 FAM53CQ9NYF3 392 aa7.83□□□□□ -1.16
PMS1-202ENST00000374826 RSF1Q96T23 1441 aaPredicted RBP7.83□□□□□ -1.16
PMS1-202ENST00000374826 PRDM2Q13029 1718 aa7.83□□□□□ -1.16
PMS1-202ENST00000374826 LRRC10BA6NIK2 292 aa7.82□□□□□ -1.16
PMS1-202ENST00000374826 ZP2Q05996 745 aa7.82□□□□□ -1.16
PMS1-202ENST00000374826 PPM1JQ5JR12 505 aa7.82□□□□□ -1.16
PMS1-202ENST00000374826 NXPE4Q6UWF7 544 aa7.82□□□□□ -1.16
PMS1-202ENST00000374826 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
PMS1-202ENST00000374826 ZSWIM9Q86XI8 627 aa7.82□□□□□ -1.16
PMS1-202ENST00000374826 SPACA3Q8IXA5 215 aa7.82□□□□□ -1.16
PMS1-202ENST00000374826 CBX8Q9HC52 389 aa7.82□□□□□ -1.16
PMS1-202ENST00000374826 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.82□□□□□ -1.16
PMS1-202ENST00000374826 TOP2AP11388 1531 aaKnown RBP7.82□□□□□ -1.16
PMS1-202ENST00000374826 ZNF503-AS2A6NEH8 195 aa7.81□□□□□ -1.16
PMS1-202ENST00000374826 NTF4P34130 210 aa7.81□□□□□ -1.16
PMS1-202ENST00000374826 RING1Q06587 406 aa7.81□□□□□ -1.16
PMS1-202ENST00000374826 IKZF1Q13422 519 aa7.81□□□□□ -1.16
PMS1-202ENST00000374826 NKPD1Q17RQ9 610 aa7.81□□□□□ -1.16
PMS1-202ENST00000374826 BHLHE22Q8NFJ8 381 aaPredicted RBP7.81□□□□□ -1.16
PMS1-202ENST00000374826 ACSBG1Q96GR2 724 aa7.81□□□□□ -1.16
PMS1-202ENST00000374826 CSADQ9Y600 493 aa7.81□□□□□ -1.16
PMS1-202ENST00000374826 PATL2C9JE40 543 aaKnown RBP7.8□□□□□ -1.16
PMS1-202ENST00000374826 BMP6P22004 513 aa7.8□□□□□ -1.16
PMS1-202ENST00000374826 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.8□□□□□ -1.16
PMS1-202ENST00000374826 GRIN3AQ8TCU5 1115 aa7.8□□□□□ -1.16
PMS1-202ENST00000374826 NECAB3Q96P71 396 aaPredicted RBP7.8□□□□□ -1.16
PMS1-202ENST00000374826 TREHO43280 583 aa7.79□□□□□ -1.16
PMS1-202ENST00000374826 DSC3Q14574 896 aa7.79□□□□□ -1.16
PMS1-202ENST00000374826 KCNMB1Q16558 191 aa7.79□□□□□ -1.16
PMS1-202ENST00000374826 C12orf40Q86WS4 652 aa7.79□□□□□ -1.16
PMS1-202ENST00000374826 C3orf58Q8NDZ4 430 aa7.79□□□□□ -1.16
PMS1-202ENST00000374826 CTNND2Q9UQB3 1225 aa7.79□□□□□ -1.16
PMS1-202ENST00000374826 PNMA6FA0A0J9YX94 578 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 DCDC2CA8MYV0 355 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 FANCGO15287 622 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 EOMESO95936 686 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 PLCB3Q01970 1234 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 MLANAQ16655 118 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 KRTAP19-4Q3LI73 84 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 UBE3DQ7Z6J8 389 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 LMCD1Q9NZU5 365 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 KIF21AQ7Z4S6 1674 aa7.78□□□□□ -1.16
PMS1-202ENST00000374826 TRIM37O94972 964 aa7.77□□□□□ -1.17
PMS1-202ENST00000374826 AFMP43652 599 aa7.77□□□□□ -1.17
PMS1-202ENST00000374826 FYB2Q5VWT5 728 aa7.77□□□□□ -1.17
PMS1-202ENST00000374826 CDC37L1Q7L3B6 337 aa7.77□□□□□ -1.17
PMS1-202ENST00000374826 CILP2Q8IUL8 1156 aa7.77□□□□□ -1.17
PMS1-202ENST00000374826 ZSCAN29Q8IWY8 852 aaPredicted RBP7.77□□□□□ -1.17
PMS1-202ENST00000374826 KRTAP4-2Q9BYR5 136 aa7.77□□□□□ -1.17
PMS1-202ENST00000374826 PICK1Q9NRD5 415 aa7.77□□□□□ -1.17
PMS1-202ENST00000374826 PITPNM2Q9BZ72 1349 aa7.77□□□□□ -1.17
PMS1-202ENST00000374826 GNAT3A8MTJ3 354 aa7.76□□□□□ -1.17
PMS1-202ENST00000374826 ENC1O14682 589 aa7.76□□□□□ -1.17
PMS1-202ENST00000374826 CLCN7P51798 805 aa7.76□□□□□ -1.17
PMS1-202ENST00000374826 ENOX2Q16206 610 aaKnown RBP7.76□□□□□ -1.17
PMS1-202ENST00000374826 ZBTB37Q5TC79 503 aa7.76□□□□□ -1.17
PMS1-202ENST00000374826 LIN37Q96GY3 246 aaPredicted RBP7.76□□□□□ -1.17
PMS1-202ENST00000374826 ASB16Q96NS5 453 aa7.76□□□□□ -1.17
PMS1-202ENST00000374826 CEP44Q9C0F1 390 aa7.76□□□□□ -1.17
PMS1-202ENST00000374826 SAMM50Q9Y512 469 aa7.76□□□□□ -1.17
PMS1-202ENST00000374826 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.75□□□□□ -1.17
PMS1-202ENST00000374826 PAGE1O75459 146 aa7.75□□□□□ -1.17
PMS1-202ENST00000374826 MAPK8P45983 427 aa7.75□□□□□ -1.17
PMS1-202ENST00000374826 TPTE2Q6XPS3 522 aa7.75□□□□□ -1.17
PMS1-202ENST00000374826 KCT2Q8NC54 265 aa7.75□□□□□ -1.17
PMS1-202ENST00000374826 NESP48681 1621 aa7.74□□□□□ -1.17
PMS1-202ENST00000374826 PDIA4P13667 645 aaKnown RBP7.74□□□□□ -1.17
PMS1-202ENST00000374826 RAP1GAPP47736 663 aa7.74□□□□□ -1.17
PMS1-202ENST00000374826 FMR1Q06787 632 aaKnown RBP eCLIP7.74□□□□□ -1.17
PMS1-202ENST00000374826 LRRC14Q15048 493 aa7.74□□□□□ -1.17
PMS1-202ENST00000374826 SCARA3Q6AZY7 606 aa7.74□□□□□ -1.17
PMS1-202ENST00000374826 FOXQ1Q9C009 403 aa7.74□□□□□ -1.17
PMS1-202ENST00000374826 PRDM5Q9NQX1 630 aaPredicted RBP7.74□□□□□ -1.17
PMS1-202ENST00000374826 PCDHA4Q9UN74 947 aa7.74□□□□□ -1.17
PMS1-202ENST00000374826 MAPK8IP1Q9UQF2 711 aa7.74□□□□□ -1.17
PMS1-202ENST00000374826 LAMC3Q9Y6N6 1575 aa7.73□□□□□ -1.17
PMS1-202ENST00000374826 LRIG2O94898 1065 aa7.73□□□□□ -1.17
PMS1-202ENST00000374826 GSTT1P30711 240 aa7.73□□□□□ -1.17
PMS1-202ENST00000374826 CYFIP1Q7L576 1253 aa7.73□□□□□ -1.17
PMS1-202ENST00000374826 AEBP1Q8IUX7 1158 aa7.73□□□□□ -1.17
PMS1-202ENST00000374826 ZNF507Q8TCN5 953 aa7.73□□□□□ -1.17
PMS1-202ENST00000374826 GLI1P08151 1106 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 CFPP27918 469 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 RASIP1Q5U651 963 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 LLGL2Q6P1M3 1020 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 ARMCX6Q7L4S7 300 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 HSPA12BQ96MM6 686 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 TOX2Q96NM4 488 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms