RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 PTPRAP18433 802 aa27.53■■■□□ 2
COL9A2-201ENST00000372736 SLC9C2Q5TAH2 1124 aa27.53■■■□□ 2
COL9A2-201ENST00000372736 RIOK1Q9BRS2 568 aaKnown RBP27.53■■■□□ 2
COL9A2-201ENST00000372736 PICK1Q9NRD5 415 aa27.53■■■□□ 2
COL9A2-201ENST00000372736 BTBD19C9JJ37 291 aa27.52■■■□□ 2
COL9A2-201ENST00000372736 PI4KBQ9UBF8 816 aa27.52■■■□□ 2
COL9A2-201ENST00000372736 HERC5Q9UII4 1024 aaKnown RBP27.52■■■□□ 2
COL9A2-201ENST00000372736 NAV1Q8NEY1 1877 aa27.52■■■□□ 2
COL9A2-201ENST00000372736 TCRBV5S4A2TA0A5A2 114 aa27.51■■□□□ 1.99
COL9A2-201ENST00000372736 MOGSQ13724 837 aa27.51■■□□□ 1.99
COL9A2-201ENST00000372736 TAF1CQ15572 869 aaPredicted RBP27.51■■□□□ 1.99
COL9A2-201ENST00000372736 ZCCHC17Q9NP64 241 aaKnown RBP27.51■■□□□ 1.99
COL9A2-201ENST00000372736 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.51■■□□□ 1.99
COL9A2-201ENST00000372736 ZNF532Q9HCE3 1301 aa27.5■■□□□ 1.99
COL9A2-201ENST00000372736 DNAJC18Q9H819 358 aa27.5■■□□□ 1.99
COL9A2-201ENST00000372736 ECHDC1Q9NTX5 307 aa27.5■■□□□ 1.99
COL9A2-201ENST00000372736 SAP30BPQ9UHR5 308 aaKnown RBP27.5■■□□□ 1.99
COL9A2-201ENST00000372736 PALD1Q9ULE6 856 aa27.5■■□□□ 1.99
COL9A2-201ENST00000372736 ZHX2Q9Y6X8 837 aa27.5■■□□□ 1.99
COL9A2-201ENST00000372736 RRP1BQ14684 758 aaKnown RBP27.49■■□□□ 1.99
COL9A2-201ENST00000372736 METTL16Q86W50 562 aaKnown RBP27.49■■□□□ 1.99
COL9A2-201ENST00000372736 MAGEB6P1A0A0J9YX57 407 aa27.48■■□□□ 1.99
COL9A2-201ENST00000372736 CXCL11O14625 94 aa27.48■■□□□ 1.99
COL9A2-201ENST00000372736 AFG3L2Q9Y4W6 797 aa27.48■■□□□ 1.99
COL9A2-201ENST00000372736 USP5P45974 858 aa27.47■■□□□ 1.99
COL9A2-201ENST00000372736 ANKRD23Q86SG2 305 aa27.47■■□□□ 1.99
COL9A2-201ENST00000372736 CCDC84Q86UT8 332 aaPredicted RBP27.47■■□□□ 1.99
COL9A2-201ENST00000372736 ZFYVE28Q9HCC9 887 aa27.47■■□□□ 1.99
COL9A2-201ENST00000372736 A0A0G2JLL6 359 aaPredicted RBP27.46■■□□□ 1.99
COL9A2-201ENST00000372736 ADD2P35612 726 aa27.46■■□□□ 1.99
COL9A2-201ENST00000372736 CAP2P40123 477 aa27.46■■□□□ 1.99
COL9A2-201ENST00000372736 TSHZ3Q63HK5 1081 aa27.46■■□□□ 1.99
COL9A2-201ENST00000372736 PRRT2Q7Z6L0 340 aaPredicted RBP27.46■■□□□ 1.99
COL9A2-201ENST00000372736 HLA-DOAP06340 250 aa27.45■■□□□ 1.98
COL9A2-201ENST00000372736 SLC4A8Q2Y0W8 1093 aa27.45■■□□□ 1.98
COL9A2-201ENST00000372736 SLFNL1Q499Z3 407 aa27.45■■□□□ 1.98
COL9A2-201ENST00000372736 GPATCH3Q96I76 525 aa27.45■■□□□ 1.98
COL9A2-201ENST00000372736 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.45■■□□□ 1.98
COL9A2-201ENST00000372736 PKN2Q16513 984 aaKnown RBP27.44■■□□□ 1.98
COL9A2-201ENST00000372736 FOXP4Q8IVH2 680 aaPredicted RBP27.44■■□□□ 1.98
COL9A2-201ENST00000372736 LCORLQ8N3X6 602 aa27.44■■□□□ 1.98
COL9A2-201ENST00000372736 CRACR2BQ8N4Y2 399 aaPredicted RBP27.44■■□□□ 1.98
COL9A2-201ENST00000372736 LOC285556D6RIA3 1793 aa27.44■■□□□ 1.98
COL9A2-201ENST00000372736 HTTP42858 3142 aa27.43■■□□□ 1.98
COL9A2-201ENST00000372736 CHGBP05060 677 aa27.43■■□□□ 1.98
COL9A2-201ENST00000372736 SP3Q02447 781 aa27.43■■□□□ 1.98
COL9A2-201ENST00000372736 HDAC1Q13547 482 aaPredicted RBP27.43■■□□□ 1.98
COL9A2-201ENST00000372736 GPAT2Q6NUI2 795 aa27.43■■□□□ 1.98
COL9A2-201ENST00000372736 ERO1AQ96HE7 468 aa27.43■■□□□ 1.98
COL9A2-201ENST00000372736 CRNKL1Q9BZJ0 848 aaKnown RBP27.43■■□□□ 1.98
COL9A2-201ENST00000372736 ADGRA2Q96PE1 1338 aa27.42■■□□□ 1.98
COL9A2-201ENST00000372736 TRIM75PA6NK02 468 aa27.42■■□□□ 1.98
COL9A2-201ENST00000372736 PDHXO00330 501 aa27.42■■□□□ 1.98
COL9A2-201ENST00000372736 TLR2O60603 784 aa27.42■■□□□ 1.98
COL9A2-201ENST00000372736 CAP1Q01518 475 aa27.42■■□□□ 1.98
COL9A2-201ENST00000372736 AAMPQ13685 434 aa27.42■■□□□ 1.98
COL9A2-201ENST00000372736 CD99L2Q8TCZ2 262 aa27.42■■□□□ 1.98
COL9A2-201ENST00000372736 OTUD7AQ8TE49 926 aaPredicted RBP27.42■■□□□ 1.98
COL9A2-201ENST00000372736 CCDC85CA6NKD9 419 aa27.41■■□□□ 1.98
COL9A2-201ENST00000372736 JAG1P78504 1218 aa27.41■■□□□ 1.98
COL9A2-201ENST00000372736 UBE3CQ15386 1083 aa27.41■■□□□ 1.98
COL9A2-201ENST00000372736 TRIM34Q9BYJ4 488 aa27.41■■□□□ 1.98
COL9A2-201ENST00000372736 EHD4Q9H223 541 aa27.41■■□□□ 1.98
COL9A2-201ENST00000372736 ZSWIM8A7E2V4 1837 aa27.41■■□□□ 1.98
COL9A2-201ENST00000372736 MBD4O95243 580 aa27.4■■□□□ 1.98
COL9A2-201ENST00000372736 SHROOM1Q2M3G4 852 aaPredicted RBP27.4■■□□□ 1.98
COL9A2-201ENST00000372736 FASTKD5Q7L8L6 764 aaKnown RBP27.4■■□□□ 1.98
COL9A2-201ENST00000372736 OTOP1Q7RTM1 612 aa27.4■■□□□ 1.98
COL9A2-201ENST00000372736 ARMT1Q9H993 441 aa27.4■■□□□ 1.98
COL9A2-201ENST00000372736 TTC41PQ6P2S7 1318 aa27.4■■□□□ 1.98
COL9A2-201ENST00000372736 FBXO46Q6PJ61 603 aaPredicted RBP27.39■■□□□ 1.98
COL9A2-201ENST00000372736 SDR42E1Q8WUS8 393 aa27.39■■□□□ 1.98
COL9A2-201ENST00000372736 TBC1D2Q9BYX2 928 aa27.39■■□□□ 1.98
COL9A2-201ENST00000372736 SERPINB13Q9UIV8 391 aa27.39■■□□□ 1.98
COL9A2-201ENST00000372736 HPS5Q9UPZ3 1129 aa27.39■■□□□ 1.98
COL9A2-201ENST00000372736 TRIM17Q9Y577 477 aa27.39■■□□□ 1.98
COL9A2-201ENST00000372736 BAZ2AQ9UIF9 1905 aaKnown RBP27.38■■□□□ 1.97
COL9A2-201ENST00000372736 USP17L5A8MUK1 530 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 GDF11O95390 407 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 ASNSP08243 561 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 GADL1Q6ZQY3 521 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 TTC6Q86TZ1 520 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 KBTBD3Q8NAB2 608 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 ZNF280CQ8ND82 737 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 PI4K2BQ8TCG2 481 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 DCP1AQ9NPI6 582 aaPredicted RBP27.38■■□□□ 1.97
COL9A2-201ENST00000372736 SALL3Q9BXA9 1300 aa27.38■■□□□ 1.97
COL9A2-201ENST00000372736 PLCD1P51178 756 aa27.37■■□□□ 1.97
COL9A2-201ENST00000372736 SPP2Q13103 211 aa27.37■■□□□ 1.97
COL9A2-201ENST00000372736 ZSCAN25Q6NSZ9 544 aa27.37■■□□□ 1.97
COL9A2-201ENST00000372736 EXOC6Q8TAG9 804 aa27.37■■□□□ 1.97
COL9A2-201ENST00000372736 GCC1Q96CN9 775 aa27.37■■□□□ 1.97
COL9A2-201ENST00000372736 PARK7Q99497 189 aaKnown RBP27.37■■□□□ 1.97
COL9A2-201ENST00000372736 ZBTB21Q9ULJ3 1066 aa27.37■■□□□ 1.97
COL9A2-201ENST00000372736 TATDN1Q6P1N9 297 aa27.36■■□□□ 1.97
COL9A2-201ENST00000372736 C17orf99Q6UX52 265 aa27.36■■□□□ 1.97
COL9A2-201ENST00000372736 GINM1Q9NU53 330 aa27.36■■□□□ 1.97
COL9A2-201ENST00000372736 SLC45A1Q9Y2W3 748 aa27.36■■□□□ 1.97
COL9A2-201ENST00000372736 PRKAB2O43741 272 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 CYP2C8P10632 490 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms