RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 FAM205AQ6ZU69 1335 aa29.11■■■□□ 2.25
CTSA-203ENST00000372459 RTN1Q16799 776 aa29.11■■■□□ 2.25
CTSA-203ENST00000372459 SLF2Q8IX21 1173 aa29.11■■■□□ 2.25
CTSA-203ENST00000372459 ALG1Q9BT22 464 aa29.11■■■□□ 2.25
CTSA-203ENST00000372459 STK36Q9NRP7 1315 aa29.1■■■□□ 2.25
CTSA-203ENST00000372459 CCDC196A0A1B0GTZ2 297 aa29.1■■■□□ 2.25
CTSA-203ENST00000372459 PRDM1O75626 825 aa29.1■■■□□ 2.25
CTSA-203ENST00000372459 EN1Q05925 392 aaPredicted RBP29.1■■■□□ 2.25
CTSA-203ENST00000372459 PDE4BQ07343 736 aa29.1■■■□□ 2.25
CTSA-203ENST00000372459 OTUD7BQ6GQQ9 843 aa29.1■■■□□ 2.25
CTSA-203ENST00000372459 DPP8Q6V1X1 898 aaPredicted RBP29.1■■■□□ 2.25
CTSA-203ENST00000372459 ZNF654Q8IZM8 581 aa29.1■■■□□ 2.25
CTSA-203ENST00000372459 PHKBQ93100 1093 aa29.1■■■□□ 2.25
CTSA-203ENST00000372459 RTFDC1Q9BY42 306 aaPredicted RBP29.1■■■□□ 2.25
CTSA-203ENST00000372459 ZC3H12CQ9C0D7 883 aaKnown RBP29.1■■■□□ 2.25
CTSA-203ENST00000372459 ANO8Q9HCE9 1232 aaPredicted RBP29.1■■■□□ 2.25
CTSA-203ENST00000372459 STK32BQ9NY57 414 aa29.1■■■□□ 2.25
CTSA-203ENST00000372459 MKRN1Q9UHC7 482 aaKnown RBP29.1■■■□□ 2.25
CTSA-203ENST00000372459 RIMBP2O15034 1052 aa29.09■■■□□ 2.25
CTSA-203ENST00000372459 IFNAR1P17181 557 aa29.09■■■□□ 2.25
CTSA-203ENST00000372459 SSRP1Q08945 709 aaKnown RBP29.09■■■□□ 2.25
CTSA-203ENST00000372459 CYP2D6P10635 497 aa29.08■■■□□ 2.25
CTSA-203ENST00000372459 PPP2R5BQ15173 497 aa29.08■■■□□ 2.25
CTSA-203ENST00000372459 AMOTL1Q8IY63 956 aa29.08■■■□□ 2.25
CTSA-203ENST00000372459 ENAHQ8N8S7 591 aaPredicted RBP29.08■■■□□ 2.25
CTSA-203ENST00000372459 ZNF622Q969S3 477 aaKnown RBP eCLIP29.08■■■□□ 2.257e-8■□□□□ 9.1
CTSA-203ENST00000372459 FMNL1O95466 1100 aaPredicted RBP29.08■■■□□ 2.25
CTSA-203ENST00000372459 NT5C2P49902 561 aa29.08■■■□□ 2.25
CTSA-203ENST00000372459 IFIT1BQ5T764 474 aaKnown RBP29.08■■■□□ 2.25
CTSA-203ENST00000372459 BRAPQ7Z569 592 aa29.08■■■□□ 2.25
CTSA-203ENST00000372459 ILDR1Q86SU0 546 aaPredicted RBP29.08■■■□□ 2.25
CTSA-203ENST00000372459 GPR75-ASB3A0A0A6YYF3 556 aa29.07■■■□□ 2.24
CTSA-203ENST00000372459 USP17L8P0C7I0 530 aa29.07■■■□□ 2.24
CTSA-203ENST00000372459 BTDP43251 543 aa29.07■■■□□ 2.24
CTSA-203ENST00000372459 C2CD5Q86YS7 1000 aa29.07■■■□□ 2.24
CTSA-203ENST00000372459 KLHL34Q8N239 644 aa29.07■■■□□ 2.24
CTSA-203ENST00000372459 FANCBQ8NB91 859 aa29.07■■■□□ 2.24
CTSA-203ENST00000372459 WASF1Q92558 559 aa29.07■■■□□ 2.24
CTSA-203ENST00000372459 FAM163AQ96GL9 167 aaPredicted RBP29.07■■■□□ 2.24
CTSA-203ENST00000372459 NASPP49321 788 aaPredicted RBP29.06■■■□□ 2.24
CTSA-203ENST00000372459 EVX2Q03828 476 aa29.06■■■□□ 2.24
CTSA-203ENST00000372459 C12orf60Q5U649 245 aa29.06■■■□□ 2.24
CTSA-203ENST00000372459 NUP133Q8WUM0 1156 aa29.06■■■□□ 2.24
CTSA-203ENST00000372459 SLC26A6Q9BXS9 759 aa29.06■■■□□ 2.24
CTSA-203ENST00000372459 RCOR1Q9UKL0 485 aa29.06■■■□□ 2.24
CTSA-203ENST00000372459 PLCG2P16885 1265 aa29.06■■■□□ 2.24
CTSA-203ENST00000372459 GTF2IP78347 998 aa29.06■■■□□ 2.24
CTSA-203ENST00000372459 OLFM4Q6UX06 510 aa29.06■■■□□ 2.24
CTSA-203ENST00000372459 DLEC1Q9Y238 1755 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 H0YIN7 160 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 CEBPZQ03701 1054 aaKnown RBP29.05■■■□□ 2.24
CTSA-203ENST00000372459 STYK1Q6J9G0 422 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 CATIPQ7Z7H3 387 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 TRIM22Q8IYM9 498 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 TGFBRAP1Q8WUH2 860 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 USP28Q96RU2 1077 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 RBSNQ9H1K0 784 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 TSPY26PQ9H489 355 aa29.05■■■□□ 2.24
CTSA-203ENST00000372459 TRIM29Q14134 588 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 AIFM3Q96NN9 605 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 EYA3Q99504 573 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 GJB4Q9NTQ9 266 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 SUGT1Q9Y2Z0 365 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 QSER1Q2KHR3 1735 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 NAV1Q8NEY1 1877 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 KIF23Q02241 960 aaPredicted RBP29.04■■■□□ 2.24
CTSA-203ENST00000372459 PGBD1Q96JS3 809 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 ECM29Q5VYK3 1845 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 GAKO14976 1311 aa29.04■■■□□ 2.24
CTSA-203ENST00000372459 ROBO3Q96MS0 1386 aa29.03■■■□□ 2.24
CTSA-203ENST00000372459 KRT40Q6A162 431 aa29.03■■■□□ 2.24
CTSA-203ENST00000372459 CALM1P0DP23 149 aa29.02■■■□□ 2.24
CTSA-203ENST00000372459 CALM2P0DP24 149 aa29.02■■■□□ 2.24
CTSA-203ENST00000372459 CALM3P0DP25 149 aa29.02■■■□□ 2.24
CTSA-203ENST00000372459 TSPY2A6NKD2 308 aa29.02■■■□□ 2.24
CTSA-203ENST00000372459 BICD2Q8TD16 824 aa29.02■■■□□ 2.24
CTSA-203ENST00000372459 LIG1P18858 919 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 FAM47AQ5JRC9 791 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 NBPF11Q86T75 865 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 TEX11Q8IYF3 940 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 CRACR2BQ8N4Y2 399 aaPredicted RBP29.01■■■□□ 2.23
CTSA-203ENST00000372459 FTOQ9C0B1 505 aaKnown RBP eCLIP29.01■■■□□ 2.23
CTSA-203ENST00000372459 RTEL1Q9NZ71 1219 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 G3V3G9 751 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 DDAH1O94760 285 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 POLR3DP05423 398 aaPredicted RBP29.01■■■□□ 2.23
CTSA-203ENST00000372459 DCAF8Q5TAQ9 597 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 MYSM1Q5VVJ2 828 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 MAPKAPK5Q8IW41 473 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 FBXW7Q969H0 707 aa29.01■■■□□ 2.23
CTSA-203ENST00000372459 DEXIO95424 95 aa29■■■□□ 2.23
CTSA-203ENST00000372459 SLC4A8Q2Y0W8 1093 aa29■■■□□ 2.23
CTSA-203ENST00000372459 RBM28Q9NW13 759 aaKnown RBP29■■■□□ 2.23
CTSA-203ENST00000372459 KIF28PB7ZC32 967 aa28.99■■■□□ 2.23
CTSA-203ENST00000372459 CLCN1P35523 988 aa28.99■■■□□ 2.23
CTSA-203ENST00000372459 ANP32BQ92688 251 aaKnown RBP28.99■■■□□ 2.23
CTSA-203ENST00000372459 CDK5RAP2Q96SN8 1893 aa28.99■■■□□ 2.23
CTSA-203ENST00000372459 DOK7Q18PE1 504 aa28.99■■■□□ 2.23
CTSA-203ENST00000372459 DDX19AQ9NUU7 478 aaKnown RBP28.99■■■□□ 2.23
CTSA-203ENST00000372459 RHBDL3P58872 404 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms