RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 LPAR1Q92633 364 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 TRIM43Q96BQ3 446 aaPredicted RBP10.07□□□□□ -0.8
YIPF3-201ENST00000372417 FAM84BQ96KN1 310 aaPredicted RBP10.07□□□□□ -0.8
YIPF3-201ENST00000372417 SPINK5Q9NQ38 1064 aaPredicted RBP10.07□□□□□ -0.8
YIPF3-201ENST00000372417 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 DDX20Q9UHI6 824 aaKnown RBP10.07□□□□□ -0.8
YIPF3-201ENST00000372417 A0A0G2JMZ2 1700 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 ZNF318Q5VUA4 2279 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 SPTBN4Q9H254 2564 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 ATRNL1Q5VV63 1379 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 ZNFX1Q9P2E3 1918 aaKnown RBP10.06□□□□□ -0.8
YIPF3-201ENST00000372417 PI4KAP2A4QPH2 592 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 KCNQ1P51787 676 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 EPHB4P54760 987 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 UBE4AQ14139 1066 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 SNX17Q15036 470 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 HHIPL2Q6UWX4 724 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 VPS37DQ86XT2 251 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 PI4KAP1Q8N8J0 262 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 APBA2Q99767 749 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 IQSEC3Q9UPP2 1182 aaPredicted RBP10.06□□□□□ -0.8
YIPF3-201ENST00000372417 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
YIPF3-201ENST00000372417 LRRFIP2Q9Y608 721 aaKnown RBP10.06□□□□□ -0.8
YIPF3-201ENST00000372417 BRWD1Q9NSI6 2320 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 KBTBD13C9JR72 458 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 FRAT2O75474 233 aaPredicted RBP10.05□□□□□ -0.8
YIPF3-201ENST00000372417 FPGSQ05932 587 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 NFIAQ12857 509 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 GCKRQ14397 625 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 NEUROD2Q15784 382 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 CCDC129Q6ZRS4 1044 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 USP6NLQ92738 828 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 PBX4Q9BYU1 374 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 ASCC2Q9H1I8 757 aaPredicted RBP10.05□□□□□ -0.8
YIPF3-201ENST00000372417 CNNM1Q9NRU3 951 aa10.05□□□□□ -0.8
YIPF3-201ENST00000372417 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
YIPF3-201ENST00000372417 PRR33A8MZF0 331 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 CTNND1O60716 968 aaKnown RBP10.04□□□□□ -0.8
YIPF3-201ENST00000372417 CNGA1P29973 690 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 MAPK4P31152 587 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 PBX2P40425 430 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 CASP7P55210 303 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 TAF7LQ5H9L4 462 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 GJC2Q5T442 439 aaPredicted RBP10.04□□□□□ -0.8
YIPF3-201ENST00000372417 MFSD14CQ5VZR4 134 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 LDHAL6AQ6ZMR3 332 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
YIPF3-201ENST00000372417 MICALL1Q8N3F8 863 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 KHSRPQ92945 711 aaKnown RBP eCLIP10.04□□□□□ -0.8
YIPF3-201ENST00000372417 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.04□□□□□ -0.8
YIPF3-201ENST00000372417 FAM198AQ9UFP1 575 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 SUGT1Q9Y2Z0 365 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 DAGLAQ9Y4D2 1042 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 UTYO14607 1347 aa10.04□□□□□ -0.8
YIPF3-201ENST00000372417 ERC2O15083 957 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 RAG1P15918 1043 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 ITGB8P26012 769 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 FOXK2Q01167 660 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
YIPF3-201ENST00000372417 CDC42EP5Q6NZY7 148 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 CCAR1Q8IX12 1150 aaKnown RBP10.03□□□□□ -0.8
YIPF3-201ENST00000372417 ARRDC4Q8NCT1 418 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 GPRC5AQ8NFJ5 357 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 MBIPQ9NS73 344 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 TACC3Q9Y6A5 838 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 ZNF236Q9UL36 1845 aa10.03□□□□□ -0.8
YIPF3-201ENST00000372417 PI4K2BG5E9Z4 385 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 ELL2O00472 640 aaPredicted RBP10.02□□□□□ -0.81
YIPF3-201ENST00000372417 CLTBP09497 229 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 HMGCS2P54868 508 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 IRX3P78415 501 aaPredicted RBP10.02□□□□□ -0.81
YIPF3-201ENST00000372417 MORN1Q5T089 497 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 C1orf53Q5VUE5 145 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 CCDC30Q5VVM6 783 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 GPR142Q7Z601 462 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 PLEKHH3Q7Z736 793 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 ZNF594Q96JF6 807 aaPredicted RBP10.02□□□□□ -0.81
YIPF3-201ENST00000372417 MYH16Q9H6N6 1097 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
YIPF3-201ENST00000372417 TRIM35Q9UPQ4 493 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 CLSPNQ9HAW4 1339 aa10.02□□□□□ -0.81
YIPF3-201ENST00000372417 GRXCR1A8MXD5 290 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 KIAA0355O15063 1070 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 TLE2Q04725 743 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 SPP2Q13103 211 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 CCDC57Q2TAC2 916 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 CAVIN4Q5BKX8 364 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 FBXO33Q7Z6M2 555 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 ZFPM1Q8IX07 1006 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 HERVK_113Q902F9 699 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 UIMC1Q96RL1 719 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 CHMP4AQ9BY43 222 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 KCNH6Q9H252 994 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 MSRAQ9UJ68 235 aa10.01□□□□□ -0.81
YIPF3-201ENST00000372417 TLL1O43897 1013 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 PEX10O60683 326 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 MYCNP04198 464 aaPredicted RBP10□□□□□ -0.81
YIPF3-201ENST00000372417 ERVK-9P63128 1117 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 ERVK-24P63145 666 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms