RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CERS3Q8IU89 383 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 ZKSCAN4Q969J2 545 aaPredicted RBP12.47□□□□□ -0.41
COL5A1-202ENST00000371820 CCDC8Q9H0W5 538 aaPredicted RBP12.47□□□□□ -0.41
COL5A1-202ENST00000371820 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
COL5A1-202ENST00000371820 KIAA0100Q14667 2235 aaKnown RBP12.47□□□□□ -0.41
COL5A1-202ENST00000371820 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.41
COL5A1-202ENST00000371820 ZSWIM8A7E2V4 1837 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 BTBD19C9JJ37 291 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 PPATQ06203 517 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 SNAPC2Q13487 334 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 PICALMQ13492 652 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 TBC1D9Q6ZT07 1266 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 MIGA2Q7L4E1 593 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 RHPN1Q8TCX5 695 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 EAF2Q96CJ1 260 aaPredicted RBP12.46□□□□□ -0.41
COL5A1-202ENST00000371820 ZNF333Q96JL9 665 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 ZNF112Q9UJU3 913 aa12.46□□□□□ -0.41
COL5A1-202ENST00000371820 MKI67P46013 3256 aaKnown RBP12.45□□□□□ -0.42
COL5A1-202ENST00000371820 TLR2O60603 784 aa12.45□□□□□ -0.42
COL5A1-202ENST00000371820 INPP5BP32019 993 aa12.45□□□□□ -0.42
COL5A1-202ENST00000371820 RHBDL3P58872 404 aa12.45□□□□□ -0.42
COL5A1-202ENST00000371820 ARHGEF6Q15052 776 aa12.45□□□□□ -0.42
COL5A1-202ENST00000371820 NOL9Q5SY16 702 aaKnown RBP12.45□□□□□ -0.42
COL5A1-202ENST00000371820 CASC1Q6TDU7 716 aa12.45□□□□□ -0.42
COL5A1-202ENST00000371820 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
COL5A1-202ENST00000371820 PTCH2Q9Y6C5 1203 aa12.45□□□□□ -0.42
COL5A1-202ENST00000371820 BRCA2P51587 3418 aa12.45□□□□□ -0.42
COL5A1-202ENST00000371820 ATRNL1Q5VV63 1379 aa12.44□□□□□ -0.42
COL5A1-202ENST00000371820 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-202ENST00000371820 IFIT2P09913 472 aaKnown RBP12.44□□□□□ -0.42
COL5A1-202ENST00000371820 ZAP70P43403 619 aa12.44□□□□□ -0.42
COL5A1-202ENST00000371820 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
COL5A1-202ENST00000371820 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-202ENST00000371820 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
COL5A1-202ENST00000371820 GBP4Q96PP9 640 aa12.44□□□□□ -0.42
COL5A1-202ENST00000371820 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
COL5A1-202ENST00000371820 PICK1Q9NRD5 415 aa12.44□□□□□ -0.42
COL5A1-202ENST00000371820 TLR7Q9NYK1 1049 aaKnown RBP12.44□□□□□ -0.42
COL5A1-202ENST00000371820 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
COL5A1-202ENST00000371820 TBC1D12O60347 775 aa12.43□□□□□ -0.42
COL5A1-202ENST00000371820 IDH1O75874 414 aaKnown RBP12.43□□□□□ -0.42
COL5A1-202ENST00000371820 EN2P19622 333 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-202ENST00000371820 MCM4P33991 863 aa12.43□□□□□ -0.42
COL5A1-202ENST00000371820 MFAP1P55081 439 aaKnown RBP12.43□□□□□ -0.42
COL5A1-202ENST00000371820 PPP4CP60510 307 aa12.43□□□□□ -0.42
COL5A1-202ENST00000371820 LACTBP83111 547 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-202ENST00000371820 SLC9C1Q4G0N8 1177 aa12.43□□□□□ -0.42
COL5A1-202ENST00000371820 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
COL5A1-202ENST00000371820 ZNF384Q8TF68 577 aa12.43□□□□□ -0.42
COL5A1-202ENST00000371820 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL5A1-202ENST00000371820 ARHGAP39Q9C0H5 1083 aa12.43□□□□□ -0.42
COL5A1-202ENST00000371820 OSBPL5Q9H0X9 879 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-202ENST00000371820 DHX36Q9H2U1 1008 aaKnown RBP12.43□□□□□ -0.42
COL5A1-202ENST00000371820 AATFQ9NY61 560 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL5A1-202ENST00000371820 KCNH4Q9UQ05 1017 aa12.43□□□□□ -0.42
COL5A1-202ENST00000371820 ADGRA2Q96PE1 1338 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 CYP7A1P22680 504 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 MAP3K10Q02779 954 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 KIF22Q14807 665 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 ANKRD23Q86SG2 305 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 NBPF11Q86T75 865 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 ZFPM1Q8IX07 1006 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 SCYL3Q8IZE3 742 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
COL5A1-202ENST00000371820 DDX4Q9NQI0 724 aaKnown RBP12.42□□□□□ -0.42
COL5A1-202ENST00000371820 HERC5Q9UII4 1024 aaKnown RBP12.42□□□□□ -0.42
COL5A1-202ENST00000371820 DDTLA6NHG4 134 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-202ENST00000371820 GOLGA6L22H0YM25 854 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 APBB1O00213 710 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 CTNND1O60716 968 aaKnown RBP12.41□□□□□ -0.42
COL5A1-202ENST00000371820 CDC45O75419 566 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 GNRH1P01148 92 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 PRMT2P55345 433 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 MOGSQ13724 837 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 C17orf99Q6UX52 265 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 SLKQ9H2G2 1235 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-202ENST00000371820 DCTPP1Q9H773 170 aa12.41□□□□□ -0.42
COL5A1-202ENST00000371820 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL5A1-202ENST00000371820 PIH1D3Q9NQM4 214 aaKnown RBP12.41□□□□□ -0.42
COL5A1-202ENST00000371820 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 PHF20L1A8MW92 1017 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 PDHXO00330 501 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 CXCL11O14625 94 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 HLA-DOAP06340 250 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 SH3BP5LQ7L8J4 393 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 FASTKD5Q7L8L6 764 aaKnown RBP12.4□□□□□ -0.42
COL5A1-202ENST00000371820 MAGEB6Q8N7X4 407 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 SH3RF3Q8TEJ3 882 aaPredicted RBP12.4□□□□□ -0.42
COL5A1-202ENST00000371820 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 CPA4Q9UI42 421 aa12.4□□□□□ -0.42
COL5A1-202ENST00000371820 CTGFP29279 349 aa12.39□□□□□ -0.43
COL5A1-202ENST00000371820 CRACR2BQ8N4Y2 399 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-202ENST00000371820 SH3TC2Q8TF17 1288 aa12.39□□□□□ -0.43
COL5A1-202ENST00000371820 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
COL5A1-202ENST00000371820 LNPKQ9C0E8 428 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms