RNA–Protein interactions for RNA: ENST00000369215.4

PRDM13-202, Transcript of PR/SET domain 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM13, Length 2,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-202ENST00000369215 TBC1D16Q8TBP0 767 aa27.41■■□□□ 1.98
PRDM13-202ENST00000369215 ZSCAN10Q96SZ4 725 aaPredicted RBP27.41■■□□□ 1.98
PRDM13-202ENST00000369215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.41■■□□□ 1.98
PRDM13-202ENST00000369215 FMNL1O95466 1100 aaPredicted RBP27.4■■□□□ 1.98
PRDM13-202ENST00000369215 RTEL1Q9NZ71 1219 aa27.4■■□□□ 1.98
PRDM13-202ENST00000369215 CCDC196A0A1B0GTZ2 297 aa27.4■■□□□ 1.98
PRDM13-202ENST00000369215 PPEF1O14829 653 aaPredicted RBP27.4■■□□□ 1.98
PRDM13-202ENST00000369215 FUCA2Q9BTY2 467 aa27.4■■□□□ 1.98
PRDM13-202ENST00000369215 SLC26A6Q9BXS9 759 aa27.4■■□□□ 1.98
PRDM13-202ENST00000369215 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.4■■□□□ 1.98
PRDM13-202ENST00000369215 ORC4O43929 436 aa27.39■■□□□ 1.98
PRDM13-202ENST00000369215 SLC3A2P08195 630 aaKnown RBP27.39■■□□□ 1.98
PRDM13-202ENST00000369215 KRT40Q6A162 431 aa27.39■■□□□ 1.98
PRDM13-202ENST00000369215 POLLQ9UGP5 575 aa27.39■■□□□ 1.98
PRDM13-202ENST00000369215 PRDM1O75626 825 aa27.39■■□□□ 1.97
PRDM13-202ENST00000369215 POLR3DP05423 398 aaPredicted RBP27.39■■□□□ 1.97
PRDM13-202ENST00000369215 RXRBP28702 533 aa27.39■■□□□ 1.97
PRDM13-202ENST00000369215 GRIK5Q16478 980 aa27.39■■□□□ 1.97
PRDM13-202ENST00000369215 SP8Q8IXZ3 490 aa27.39■■□□□ 1.97
PRDM13-202ENST00000369215 LTBP1Q14766 1721 aa27.39■■□□□ 1.97
PRDM13-202ENST00000369215 KIF28PB7ZC32 967 aa27.38■■□□□ 1.97
PRDM13-202ENST00000369215 LDHCP07864 332 aa27.38■■□□□ 1.97
PRDM13-202ENST00000369215 MYSM1Q5VVJ2 828 aa27.38■■□□□ 1.97
PRDM13-202ENST00000369215 IQCA1Q86XH1 822 aa27.38■■□□□ 1.97
PRDM13-202ENST00000369215 ENAHQ8N8S7 591 aaPredicted RBP27.38■■□□□ 1.97
PRDM13-202ENST00000369215 WASF1Q92558 559 aa27.38■■□□□ 1.97
PRDM13-202ENST00000369215 MAP3K11Q16584 847 aa27.38■■□□□ 1.97
PRDM13-202ENST00000369215 FANCBQ8NB91 859 aa27.38■■□□□ 1.97
PRDM13-202ENST00000369215 BAG3O95817 575 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 TRIM29Q14134 588 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 DIXDC1Q155Q3 683 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 NUP133Q8WUM0 1156 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 NOL10Q9BSC4 688 aaKnown RBP27.37■■□□□ 1.97
PRDM13-202ENST00000369215 CLSTN2Q9H4D0 955 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 DLEC1Q9Y238 1755 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 NR1I2O75469 434 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 CYP2D6P10635 497 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 TRIM22Q8IYM9 498 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 TNMDQ9H2S6 317 aa27.37■■□□□ 1.97
PRDM13-202ENST00000369215 C6orf229H3BNL8 230 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 OFD1O75665 1012 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 PPP4CP60510 307 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 EVX2Q03828 476 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 PPP2R5BQ15173 497 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 MCM9Q9NXL9 1143 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 ZNF500O60304 480 aaPredicted RBP27.36■■□□□ 1.97
PRDM13-202ENST00000369215 USP5P45974 858 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 IFIT1BQ5T764 474 aaKnown RBP27.36■■□□□ 1.97
PRDM13-202ENST00000369215 SH3RF3Q8TEJ3 882 aaPredicted RBP27.36■■□□□ 1.97
PRDM13-202ENST00000369215 FBXO41Q8TF61 875 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 POLR3EQ9NVU0 708 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 ATP6V0A2Q9Y487 856 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 MROH7-TTC4A0A0A0MT08 1334 aa27.36■■□□□ 1.97
PRDM13-202ENST00000369215 CAMK4Q16566 473 aa27.35■■□□□ 1.97
PRDM13-202ENST00000369215 MKRN1Q9UHC7 482 aaKnown RBP27.35■■□□□ 1.97
PRDM13-202ENST00000369215 ZKSCAN5Q9Y2L8 839 aa27.35■■□□□ 1.97
PRDM13-202ENST00000369215 SRGNP10124 158 aa27.35■■□□□ 1.97
PRDM13-202ENST00000369215 NPR1P16066 1061 aa27.35■■□□□ 1.97
PRDM13-202ENST00000369215 ME1P48163 572 aa27.35■■□□□ 1.97
PRDM13-202ENST00000369215 PDE4BQ07343 736 aa27.35■■□□□ 1.97
PRDM13-202ENST00000369215 CCAR1Q8IX12 1150 aaKnown RBP27.35■■□□□ 1.97
PRDM13-202ENST00000369215 YEATS4O95619 227 aa27.34■■□□□ 1.97
PRDM13-202ENST00000369215 CCDC192P0DO97 292 aa27.34■■□□□ 1.97
PRDM13-202ENST00000369215 UVSSAQ2YD98 709 aa27.34■■□□□ 1.97
PRDM13-202ENST00000369215 NBPF11Q86T75 865 aa27.34■■□□□ 1.97
PRDM13-202ENST00000369215 CRACR2BQ8N4Y2 399 aaPredicted RBP27.34■■□□□ 1.97
PRDM13-202ENST00000369215 LINC00301Q8NCQ3 95 aa27.34■■□□□ 1.97
PRDM13-202ENST00000369215 CCDC39Q9UFE4 941 aa27.34■■□□□ 1.97
PRDM13-202ENST00000369215 CLIC4Q9Y696 253 aa27.34■■□□□ 1.97
PRDM13-202ENST00000369215 TNS1Q9HBL0 1735 aaKnown RBP27.34■■□□□ 1.97
PRDM13-202ENST00000369215 STK38Q15208 465 aa27.33■■□□□ 1.97
PRDM13-202ENST00000369215 CATIPQ7Z7H3 387 aa27.33■■□□□ 1.97
PRDM13-202ENST00000369215 PARP3Q9Y6F1 533 aa27.33■■□□□ 1.97
PRDM13-202ENST00000369215 MMP10P09238 476 aa27.33■■□□□ 1.97
PRDM13-202ENST00000369215 USP17L8P0C7I0 530 aa27.33■■□□□ 1.97
PRDM13-202ENST00000369215 CERS3Q8IU89 383 aa27.33■■□□□ 1.97
PRDM13-202ENST00000369215 UBE2Q2LH0YL09 131 aa27.32■■□□□ 1.96
PRDM13-202ENST00000369215 GNL2Q13823 731 aaKnown RBP27.32■■□□□ 1.96
PRDM13-202ENST00000369215 RBM43Q6ZSC3 357 aaKnown RBP27.32■■□□□ 1.96
PRDM13-202ENST00000369215 KCNG4Q8TDN1 519 aa27.32■■□□□ 1.96
PRDM13-202ENST00000369215 RTFDC1Q9BY42 306 aaPredicted RBP27.32■■□□□ 1.96
PRDM13-202ENST00000369215 DEXIO95424 95 aa27.32■■□□□ 1.96
PRDM13-202ENST00000369215 PDE6BP35913 854 aa27.32■■□□□ 1.96
PRDM13-202ENST00000369215 C12orf60Q5U649 245 aa27.32■■□□□ 1.96
PRDM13-202ENST00000369215 TBC1D22AQ8WUA7 517 aa27.32■■□□□ 1.96
PRDM13-202ENST00000369215 TAOK2Q9UL54 1235 aa27.32■■□□□ 1.96
PRDM13-202ENST00000369215 CCDC73Q6ZRK6 1079 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 PCDHA7Q9UN72 937 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 CALM1P0DP23 149 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 CALM2P0DP24 149 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 CALM3P0DP25 149 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 GUCY1A2P33402 732 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 MFSD14BQ5SR56 506 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 GOLPH3LQ9H4A5 285 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 NAV1Q8NEY1 1877 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 RGPD3A6NKT7 1758 aaPredicted RBP27.31■■□□□ 1.96
PRDM13-202ENST00000369215 RGPD4Q7Z3J3 1758 aa27.31■■□□□ 1.96
PRDM13-202ENST00000369215 U2AF2P26368 475 aaKnown RBP eCLIP27.3■■□□□ 1.96
PRDM13-202ENST00000369215 SF3A1Q15459 793 aaKnown RBP27.3■■□□□ 1.96
PRDM13-202ENST00000369215 ANO1Q5XXA6 986 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms