RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 C21orf2O43822 256 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 RHOQP17081 205 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 HIRAP54198 1017 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 POU4F2Q12837 409 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 NBPF1Q3BBV0 1214 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 GLIPR1L2Q4G1C9 344 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 CLEC4GQ6UXB4 293 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 CNTROBQ8N137 903 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 NANOS1Q8WY41 292 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 IFT172Q9UG01 1749 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 ZNF232Q9UNY5 417 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 BAHCC1Q9P281 2608 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 LAMA2P24043 3122 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 ANKRD30BQ9BXX2 1392 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 TIAM2Q8IVF5 1701 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 EML1O00423 815 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 TRAF5O00463 557 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 U2SURPO15042 1029 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 PTCD1O75127 700 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 LMNB1P20700 586 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 SSFA2P28290 1259 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 ECE1P42892 770 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 FOXD4Q12950 439 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 TSHZ1Q6ZSZ6 1077 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 PODNQ7Z5L7 613 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 CTU1Q7Z7A3 348 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 ZNF295-AS1Q8N0V1 137 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 BEND7Q8N7W2 519 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 NGDNQ8NEJ9 315 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 ZDHHC1Q8WTX9 485 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 PMM1Q92871 262 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 PCGF6Q9BYE7 350 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 LNPKQ9C0E8 428 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 TIMMDC1Q9NPL8 285 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 ZDHHC3Q9NYG2 299 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 PIM2Q9P1W9 311 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 CHPF2Q9P2E5 772 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 NOP58Q9Y2X3 529 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 COMMD10Q9Y6G5 202 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 EEA1Q15075 1411 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 EYSQ5T1H1 3165 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 A0A1B0GTH6 734 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 ANP32CO43423 234 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 CA12O43570 354 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 FURINP09958 794 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 TATP17735 454 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 EN2P19622 333 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 NOS2P35228 1153 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 PHKA2P46019 1235 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 FKBP5Q13451 457 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 C4orf46Q504U0 113 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 CST9Q5W186 159 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 CACTIN-AS1Q8N1I8 211 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 SPACA7Q96KW9 195 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 C2orf49Q9BVC5 232 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 TAF1DQ9H5J8 278 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 BRCA1P38398 1863 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 TOGARAM1Q9Y4F4 1720 aa4.49□□□□□ -1.69
ECHDC1-205ENST00000368295 CPDO75976 1380 aa4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 NSD2O96028 1365 aa4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 ITSN1Q15811 1721 aa4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 ERCC5P28715 1186 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 MAP2K2P36507 400 aa4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 C1orf53Q5VUE5 145 aa4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 DEFB123Q8N688 67 aa4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 IPO4Q8TEX9 1081 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 SECISBP2LQ93073 1101 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 L3MBTL2Q969R5 705 aa4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 EVI5LQ96CN4 794 aa4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 DDX21Q9NR30 783 aaKnown RBP eCLIP4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 GPC6Q9Y625 555 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-205ENST00000368295 ARFGEF1Q9Y6D6 1849 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 NFKBIEO00221 500 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 TRPA1O75762 1119 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 RECKO95980 971 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 ERICH6BQ5W0A0 696 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 RINLQ6ZS11 566 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 SYNE4Q8N205 404 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 ARMC5Q96C12 935 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 SENP7Q9BQF6 1050 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 MKNK1Q9BUB5 465 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 NAP1L2Q9ULW6 460 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 DYRK1BQ9Y463 629 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 RPS6KL1Q9Y6S9 549 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 WDR17Q8IZU2 1322 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 KIF13BQ9NQT8 1826 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 KIAA0100Q14667 2235 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 CCER2I3L3R5 266 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 GCP02774 474 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 HSP90AA1P07900 732 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 MSX1P28360 303 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 PTSQ03393 145 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 SDR16C5Q8N3Y7 309 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 RHPN1Q8TCX5 695 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 DDX54Q8TDD1 881 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 TANGO6Q9C0B7 1094 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 PHACTR1Q9C0D0 580 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 BSDC1Q9NW68 430 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 PNMA2Q9UL42 364 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms