RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 MINDY4BA8MYZ0 360 aa24.48■■□□□ 1.51
SHISA4-201ENST00000362011 USP17L12C9JPN9 530 aa24.48■■□□□ 1.51
SHISA4-201ENST00000362011 USP17L21D6R901 530 aa24.48■■□□□ 1.51
SHISA4-201ENST00000362011 ANP32AP39687 249 aaKnown RBP24.48■■□□□ 1.51
SHISA4-201ENST00000362011 PPARAQ07869 468 aa24.48■■□□□ 1.51
SHISA4-201ENST00000362011 PICALMQ13492 652 aa24.48■■□□□ 1.51
SHISA4-201ENST00000362011 ZBED3Q96IU2 234 aaPredicted RBP24.48■■□□□ 1.51
SHISA4-201ENST00000362011 JAKMIP1Q96N16 626 aaKnown RBP24.48■■□□□ 1.51
SHISA4-201ENST00000362011 TAF6LQ9Y6J9 622 aa24.48■■□□□ 1.51
SHISA4-201ENST00000362011 E7EWF7 191 aa24.47■■□□□ 1.51
SHISA4-201ENST00000362011 MYO1BO43795 1136 aa24.47■■□□□ 1.51
SHISA4-201ENST00000362011 PSMA5P28066 241 aa24.47■■□□□ 1.51
SHISA4-201ENST00000362011 ADCK5Q3MIX3 580 aa24.47■■□□□ 1.51
SHISA4-201ENST00000362011 IDI2Q9BXS1 227 aa24.47■■□□□ 1.51
SHISA4-201ENST00000362011 TM6SF1Q9BZW5 370 aa24.47■■□□□ 1.51
SHISA4-201ENST00000362011 ANAPC4Q9UJX5 808 aa24.47■■□□□ 1.51
SHISA4-201ENST00000362011 CTDSPL2Q05D32 466 aa24.46■■□□□ 1.51
SHISA4-201ENST00000362011 SPDYE2Q495Y8 402 aa24.46■■□□□ 1.51
SHISA4-201ENST00000362011 USP48Q86UV5 1035 aa24.46■■□□□ 1.51
SHISA4-201ENST00000362011 NBPF3Q9H094 633 aa24.46■■□□□ 1.51
SHISA4-201ENST00000362011 DDX4Q9NQI0 724 aaKnown RBP24.46■■□□□ 1.51
SHISA4-201ENST00000362011 ZNF70Q9UC06 446 aaPredicted RBP24.46■■□□□ 1.51
SHISA4-201ENST00000362011 SAP30BPQ9UHR5 308 aaKnown RBP24.46■■□□□ 1.51
SHISA4-201ENST00000362011 WNT10BO00744 389 aa24.45■■□□□ 1.5
SHISA4-201ENST00000362011 NPM3O75607 178 aaKnown RBP24.45■■□□□ 1.5
SHISA4-201ENST00000362011 POLR3DP05423 398 aaPredicted RBP24.45■■□□□ 1.5
SHISA4-201ENST00000362011 NOGQ13253 232 aa24.45■■□□□ 1.5
SHISA4-201ENST00000362011 KIF4BQ2VIQ3 1234 aa24.45■■□□□ 1.5
SHISA4-201ENST00000362011 STOX1Q6ZVD7 989 aa24.45■■□□□ 1.5
SHISA4-201ENST00000362011 SAMD7Q7Z3H4 446 aa24.45■■□□□ 1.5
SHISA4-201ENST00000362011 TBC1D10CQ8IV04 446 aa24.45■■□□□ 1.5
SHISA4-201ENST00000362011 OSBPL5Q9H0X9 879 aaPredicted RBP24.45■■□□□ 1.5
SHISA4-201ENST00000362011 ZNF408Q9H9D4 720 aa24.45■■□□□ 1.5
SHISA4-201ENST00000362011 COL2A1P02458 1487 aaPredicted RBP24.45■■□□□ 1.5
SHISA4-201ENST00000362011 CYP2D7A0A087X1C5 515 aa24.44■■□□□ 1.5
SHISA4-201ENST00000362011 CCDC85CA6NKD9 419 aa24.44■■□□□ 1.5
SHISA4-201ENST00000362011 EGFRP00533 1210 aa24.44■■□□□ 1.5
SHISA4-201ENST00000362011 CASTP20810 708 aaKnown RBP24.44■■□□□ 1.5
SHISA4-201ENST00000362011 CACNB3P54284 484 aa24.44■■□□□ 1.5
SHISA4-201ENST00000362011 NFIAQ12857 509 aa24.44■■□□□ 1.5
SHISA4-201ENST00000362011 TBC1D10BQ4KMP7 808 aaPredicted RBP24.44■■□□□ 1.5
SHISA4-201ENST00000362011 RBM26Q5T8P6 1007 aaKnown RBP24.44■■□□□ 1.5
SHISA4-201ENST00000362011 C12orf60Q5U649 245 aa24.44■■□□□ 1.5
SHISA4-201ENST00000362011 NEK1Q96PY6 1258 aa24.44■■□□□ 1.5
SHISA4-201ENST00000362011 ZIC5Q96T25 663 aa24.44■■□□□ 1.5
SHISA4-201ENST00000362011 CLRN2A0PK11 232 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 ENTPD3O75355 529 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 SLC3A2P08195 630 aaKnown RBP24.43■■□□□ 1.5
SHISA4-201ENST00000362011 CYP2D6P10635 497 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 AKNAD1Q5T1N1 836 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 BLOC1S2Q6QNY1 142 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 DLK2Q6UY11 383 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 IL27Q8NEV9 243 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 STAG1Q8WVM7 1258 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 MCOLN1Q9GZU1 580 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 RNF41Q9H4P4 317 aaPredicted RBP24.43■■□□□ 1.5
SHISA4-201ENST00000362011 ZSWIM6Q9HCJ5 1215 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 FAM198AQ9UFP1 575 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 ROBO3Q96MS0 1386 aa24.43■■□□□ 1.5
SHISA4-201ENST00000362011 FAM155AB1AL88 458 aaPredicted RBP24.42■■□□□ 1.5
SHISA4-201ENST00000362011 SLC34A2O95436 690 aa24.42■■□□□ 1.5
SHISA4-201ENST00000362011 HUNKP57058 714 aa24.42■■□□□ 1.5
SHISA4-201ENST00000362011 TRDNQ13061 729 aa24.42■■□□□ 1.5
SHISA4-201ENST00000362011 NBPF9Q3BBW0 867 aa24.42■■□□□ 1.5
SHISA4-201ENST00000362011 NCOA7Q8NI08 942 aa24.42■■□□□ 1.5
SHISA4-201ENST00000362011 CYP46A1Q9Y6A2 500 aa24.42■■□□□ 1.5
SHISA4-201ENST00000362011 HMGB1P09429 215 aaKnown RBP24.41■■□□□ 1.5
SHISA4-201ENST00000362011 PCP11498 1178 aaKnown RBP24.41■■□□□ 1.5
SHISA4-201ENST00000362011 NEK4P51957 841 aa24.41■■□□□ 1.5
SHISA4-201ENST00000362011 MLLT1Q03111 559 aaPredicted RBP24.41■■□□□ 1.5
SHISA4-201ENST00000362011 SLC4A8Q2Y0W8 1093 aa24.41■■□□□ 1.5
SHISA4-201ENST00000362011 FKBP1CQ5VVH2 108 aa24.41■■□□□ 1.5
SHISA4-201ENST00000362011 MFSD6Q6ZSS7 791 aa24.41■■□□□ 1.5
SHISA4-201ENST00000362011 RALYLQ86SE5 291 aaKnown RBP24.41■■□□□ 1.5
SHISA4-201ENST00000362011 TTC6Q86TZ1 520 aa24.41■■□□□ 1.5
SHISA4-201ENST00000362011 UPF3BQ9BZI7 483 aaKnown RBP24.41■■□□□ 1.5
SHISA4-201ENST00000362011 CNNM2Q9H8M5 875 aa24.41■■□□□ 1.5
SHISA4-201ENST00000362011 VEZTQ9HBM0 779 aa24.41■■□□□ 1.5
SHISA4-201ENST00000362011 TCP10L2B9ZVM9 353 aa24.4■■□□□ 1.5
SHISA4-201ENST00000362011 ST18O60284 1047 aa24.4■■□□□ 1.5
SHISA4-201ENST00000362011 TCP10Q12799 353 aa24.4■■□□□ 1.5
SHISA4-201ENST00000362011 RUFY3Q7L099 469 aa24.4■■□□□ 1.5
SHISA4-201ENST00000362011 KRT26Q7Z3Y9 468 aa24.4■■□□□ 1.5
SHISA4-201ENST00000362011 STK11IPQ8N1F8 1099 aa24.4■■□□□ 1.5
SHISA4-201ENST00000362011 NEDD4P46934 1319 aa24.4■■□□□ 1.5
SHISA4-201ENST00000362011 HLA-DOAP06340 250 aa24.39■■□□□ 1.5
SHISA4-201ENST00000362011 RPS6KB1P23443 525 aa24.39■■□□□ 1.5
SHISA4-201ENST00000362011 RGMBQ6NW40 437 aa24.39■■□□□ 1.5
SHISA4-201ENST00000362011 KRT23Q9C075 422 aa24.39■■□□□ 1.5
SHISA4-201ENST00000362011 DHX36Q9H2U1 1008 aaKnown RBP24.39■■□□□ 1.5
SHISA4-201ENST00000362011 CASP8AP2Q9UKL3 1982 aa24.39■■□□□ 1.49
SHISA4-201ENST00000362011 SMIM22K7EJ46 135 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 CPA1P15085 419 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 PLCD1P51178 756 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 EVX2Q03828 476 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 PDE4BQ07343 736 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 FAM151AQ8WW52 585 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 GBA2Q9HCG7 927 aaPredicted RBP24.38■■□□□ 1.49
SHISA4-201ENST00000362011 TOMM22Q9NS69 142 aa24.38■■□□□ 1.49
SHISA4-201ENST00000362011 TACC3Q9Y6A5 838 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms