RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 PNMA1Q8ND90 353 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 PCMTD1Q96MG8 357 aaPredicted RBP6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 TSPY26PQ9H489 355 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 SPON1Q9HCB6 807 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 GJB4Q9NTQ9 266 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 RTL9Q8NET4 1388 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 GSG1L2A8MUP6 293 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 CRKP46108 304 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 GNAQP50148 359 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 KIAA2012Q0VF49 1180 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 USH1GQ495M9 461 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 KLHL10Q6JEL2 608 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 GIMAP6Q6P9H5 292 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 PODNQ7Z5L7 613 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 SLC51AQ86UW1 340 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 FCHSD1Q86WN1 690 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 GTF3C6Q969F1 213 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 NSUN4Q96CB9 384 aaKnown RBP6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 RRP36Q96EU6 259 aaKnown RBP6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 STRCP1A6NGW2 1772 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 ZNF609O15014 1411 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 MYCNP04198 464 aaPredicted RBP6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 CALM1P0DP23 149 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 CALM2P0DP24 149 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 CALM3P0DP25 149 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 PROM2Q8N271 834 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 FANCBQ8NB91 859 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 SPC24Q8NBT2 197 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 CUL5Q93034 780 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 AIFM3Q96NN9 605 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 PLIN2Q99541 437 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 TRIM5Q9C035 493 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 CPVLQ9H3G5 476 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 HOMER2Q9NSB8 354 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 SERPINB13Q9UIV8 391 aa6.33□□□□□ -1.4
PCDH11X-202ENST00000361655 DISP2A7MBM2 1401 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 MCM7P33993 719 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 ZNF174Q15697 407 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 CCDC178Q5BJE1 867 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 SPECC1Q5M775 1068 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 JAKMIP3Q5VZ66 844 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 DPY19L2Q6NUT2 758 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 DIS3L2Q8IYB7 885 aaKnown RBP6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 ZSCAN16Q9H4T2 348 aaPredicted RBP6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 DCP1AQ9NPI6 582 aaPredicted RBP6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 SLIT2O94813 1529 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 CCDC192P0DO97 292 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 NF2P35240 595 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 TNIP1Q15025 636 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 MAP3K11Q16584 847 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 KRT40Q6A162 431 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 CC2D2BQ6DHV5 1058 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 STOX1Q6ZVD7 989 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 FBXO33Q7Z6M2 555 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 GPKOWQ92917 476 aaPredicted RBP eCLIP6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 TANGO6Q9C0B7 1094 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 APOA5Q6Q788 366 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 CYB5R4Q7L1T6 521 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 CCDC12Q8WUD4 166 aaPredicted RBP6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 KCNQ5Q9NR82 932 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 DACT1Q9NYF0 836 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 CEP131Q9UPN4 1083 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 NEDD4P46934 1319 aa6.32□□□□□ -1.4
PCDH11X-202ENST00000361655 SLC16A2P36021 539 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 PRAMEF18Q5VWM3 479 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 PIK3AP1Q6ZUJ8 805 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 CEP57L1Q8IYX8 460 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 KIF2CQ99661 725 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 PICK1Q9NRD5 415 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 PKD2L1Q9P0L9 805 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 RNF181Q9P0P0 153 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 KLRF2D3W0D1 207 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 PDIA4P13667 645 aaKnown RBP6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 UBA7P41226 1012 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 AFMP43652 599 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 LETM2Q2VYF4 491 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 CCDC174Q6PII3 467 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 USP17L2Q6R6M4 530 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 CLEC10AQ8IUN9 316 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 CNNM3Q8NE01 707 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 SMARCC2Q8TAQ2 1214 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 KIFC2Q96AC6 838 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 COL14A1Q05707 1796 aaKnown RBP6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 A0A1B0GVL5 298 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 SPTLC2O15270 562 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 GADD45BO75293 160 aaPredicted RBP6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 SMC2O95347 1197 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 DEXIO95424 95 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 CDK8P49336 464 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 SP4Q02446 784 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 ICA1Q05084 483 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 HSP90AA4PQ58FG1 418 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 CTR9Q6PD62 1173 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 KCTD1Q719H9 257 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 ZNF274Q96GC6 653 aaPredicted RBP6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 SAMM50Q9Y512 469 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 MED23Q9ULK4 1368 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
PCDH11X-202ENST00000361655 PFKFB2O60825 505 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms