RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 DNM2P50570 870 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 LONRF3Q496Y0 759 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 GIMAP7Q8NHV1 300 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 LPIN2Q92539 896 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 TACC1O75410 805 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 CTSWP56202 376 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 NOP9Q86U38 636 aaKnown RBP22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 MRPL44Q9H9J2 332 aaKnown RBP22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 SPICE1Q8N0Z3 855 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 DBNDD1Q9H9R9 158 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 CALCRLQ16602 461 aa22.73■■□□□ 1.23
CDC42BPB-201ENST00000361246 SOS1Q07889 1333 aaPredicted RBP22.73■■□□□ 1.23
CDC42BPB-201ENST00000361246 POLR2DO15514 142 aaKnown RBP22.73■■□□□ 1.23
CDC42BPB-201ENST00000361246 SKILP12757 684 aa22.73■■□□□ 1.23
CDC42BPB-201ENST00000361246 CCDC186Q7Z3E2 898 aa22.73■■□□□ 1.23
CDC42BPB-201ENST00000361246 GTPBP4Q9BZE4 634 aaKnown RBP22.73■■□□□ 1.23
CDC42BPB-201ENST00000361246 PLEKHM2Q8IWE5 1019 aa22.73■■□□□ 1.23
CDC42BPB-201ENST00000361246 KIF5AQ12840 1032 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 ZNF569Q5MCW4 686 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 PPP1R16BQ96T49 567 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 THRAP3Q9Y2W1 955 aaKnown RBP22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 SNX29Q8TEQ0 813 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 PRAG1Q86YV5 1406 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 MCM6Q14566 821 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 VPS54Q9P1Q0 977 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 UBXN2AP68543 259 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 GOLGA6L9A6NEM1 432 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 BLZF1Q9H2G9 400 aa22.72■■□□□ 1.23
CDC42BPB-201ENST00000361246 TNFAIP3P21580 790 aa22.71■■□□□ 1.23
CDC42BPB-201ENST00000361246 SPOPO43791 374 aa22.71■■□□□ 1.23
CDC42BPB-201ENST00000361246 RHOXF2BP0C7M4 288 aa22.71■■□□□ 1.23
CDC42BPB-201ENST00000361246 GCKRQ14397 625 aa22.71■■□□□ 1.23
CDC42BPB-201ENST00000361246 ANKRD35Q8N283 1001 aa22.71■■□□□ 1.23
CDC42BPB-201ENST00000361246 RHOXF2Q9BQY4 288 aa22.71■■□□□ 1.23
CDC42BPB-201ENST00000361246 PFDN4Q9NQP4 134 aa22.71■■□□□ 1.23
CDC42BPB-201ENST00000361246 RPS6KB1P23443 525 aa22.7■■□□□ 1.23
CDC42BPB-201ENST00000361246 BEND3Q5T5X7 828 aa22.7■■□□□ 1.23
CDC42BPB-201ENST00000361246 CDAN1Q8IWY9 1227 aa22.7■■□□□ 1.23
CDC42BPB-201ENST00000361246 SUGCTQ9HAC7 445 aa22.7■■□□□ 1.23
CDC42BPB-201ENST00000361246 CD19P15391 556 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 EHBP1Q8NDI1 1231 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 NUP153P49790 1475 aaKnown RBP22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 RPS8P62241 208 aaKnown RBP22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 IQUBQ8NA54 791 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 HOOK2Q96ED9 719 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 CALUO43852 315 aaPredicted RBP22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 KIFAP3Q92845 792 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 PNMA6EA0A0J9YXQ4 647 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 CTAGE9A4FU28 777 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 GTF3C6Q969F1 213 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 MYO1AQ9UBC5 1043 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 TBX22Q9Y458 520 aa22.7■■□□□ 1.22
CDC42BPB-201ENST00000361246 RAD17O75943 681 aa22.69■■□□□ 1.22
CDC42BPB-201ENST00000361246 RPL13P26373 211 aaKnown RBP22.69■■□□□ 1.22
CDC42BPB-201ENST00000361246 C4orf50Q6ZRC1 276 aa22.69■■□□□ 1.22
CDC42BPB-201ENST00000361246 ZBTB16Q05516 673 aa22.69■■□□□ 1.22
CDC42BPB-201ENST00000361246 PLEKHA4Q9H4M7 779 aa22.69■■□□□ 1.22
CDC42BPB-201ENST00000361246 PPEF1O14829 653 aaPredicted RBP22.69■■□□□ 1.22
CDC42BPB-201ENST00000361246 AS3MTQ9HBK9 375 aa22.69■■□□□ 1.22
CDC42BPB-201ENST00000361246 TNNI1P19237 187 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 FAM173BQ6P4H8 233 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 SMC1BQ8NDV3 1235 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 FAM193BQ96PV7 902 aaPredicted RBP22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 TYRO3Q06418 890 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 ABCC10Q5T3U5 1492 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 PTPRKQ15262 1439 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 ARHGAP44Q17R89 818 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 NLRX1Q86UT6 975 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 CGNQ9P2M7 1197 aaKnown RBP22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 MROH5Q6ZUA9 1318 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 SYNJ2BP-COX16A0A087WUM0 186 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 FLOT1O75955 427 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 DEXIO95424 95 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 IL13P35225 146 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 LMBR1Q8WVP7 490 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 UBLCP1Q8WVY7 318 aaPredicted RBP22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 MMS19Q96T76 1030 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 COX16Q9P0S2 106 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 DPP9Q86TI2 863 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 FBF1Q8TES7 1133 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 APPBP2Q92624 585 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 NBPF3Q9H094 633 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 MAP7D1Q3KQU3 841 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 ASAP1Q9ULH1 1129 aa22.68■■□□□ 1.22
CDC42BPB-201ENST00000361246 BSPRYQ5W0U4 402 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 GPR101Q96P66 508 aaPredicted RBP22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 FAM204AQ9H8W3 233 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 DNM3Q9UQ16 869 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 COL17A1Q9UMD9 1497 aaPredicted RBP22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 SBNO1A3KN83 1393 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 CTAGE15A4D2H0 777 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 CTAGE8P0CG41 777 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 FAM196AQ6ZSG2 479 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 CTAGE6Q86UF2 777 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 CTAGE4Q8IX94 777 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 CCT6BQ92526 530 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 WDR62O43379 1518 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 PRPHP41219 470 aa22.67■■□□□ 1.22
CDC42BPB-201ENST00000361246 SF3A3Q12874 501 aaKnown RBP eCLIP22.67■■□□□ 1.221e-7■■■□□ 16.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms