RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 FRMD3A2A2Y4 597 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 MBD4O95243 580 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 BSPRYQ5W0U4 402 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 CEP128Q6ZU80 1094 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 SLF1Q9BQI6 1058 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 PHLDB2Q86SQ0 1253 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 PTPROQ16827 1216 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 RPS6KB1P23443 525 aa17.83■□□□□ 0.45
COL18A1-203ENST00000359759 OTUD7BQ6GQQ9 843 aa17.83■□□□□ 0.45
COL18A1-203ENST00000359759 ARHGAP45Q92619 1136 aa17.83■□□□□ 0.45
COL18A1-203ENST00000359759 TTC41PQ6P2S7 1318 aa17.83■□□□□ 0.45
COL18A1-203ENST00000359759 FBXO31Q5XUX0 539 aaPredicted RBP17.83■□□□□ 0.45
COL18A1-203ENST00000359759 GBP5Q96PP8 586 aa17.83■□□□□ 0.45
COL18A1-203ENST00000359759 ARHGEF11O15085 1522 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 SESN3P58005 492 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 ANO1Q5XXA6 986 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 PLEKHM2Q8IWE5 1019 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 ARHGAP25P42331 645 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 PLCD1P51178 756 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 OPHN1O60890 802 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 BAG2O95816 211 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 DENND2CQ68D51 928 aa17.83■□□□□ 0.44
COL18A1-203ENST00000359759 LDHBP07195 334 aaKnown RBP17.82■□□□□ 0.44
COL18A1-203ENST00000359759 PRR16Q569H4 304 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 NELFCDQ8IXH7 590 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 RUFY4Q6ZNE9 571 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 RSPH3Q86UC2 560 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 ARHGAP24Q8N264 748 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 BLZF1Q9H2G9 400 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 GADD45BO75293 160 aaPredicted RBP17.82■□□□□ 0.44
COL18A1-203ENST00000359759 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
COL18A1-203ENST00000359759 CAPN7Q9Y6W3 813 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 NOS1P29475 1434 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 ARHGAP42A6NI28 874 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 KRT24Q2M2I5 525 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 STRN3Q13033 797 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 NXNQ6DKJ4 435 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 GINS2Q9Y248 185 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 TYW1BQ6NUM6 668 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
COL18A1-203ENST00000359759 TRMT44Q8IYL2 757 aaKnown RBP17.82■□□□□ 0.44
COL18A1-203ENST00000359759 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
COL18A1-203ENST00000359759 PLCB1Q9NQ66 1216 aa17.82■□□□□ 0.44
COL18A1-203ENST00000359759 ARMT1Q9H993 441 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 SLC8A3P57103 927 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 LRMPQ12912 555 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 MYRIPQ8NFW9 859 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 PTPN23Q9H3S7 1636 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 IRS4O14654 1257 aaPredicted RBP17.81■□□□□ 0.44
COL18A1-203ENST00000359759 NLRP12P59046 1061 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 SLC9C1Q4G0N8 1177 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 RIPOR2Q9Y4F9 1068 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 SMTNP53814 917 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 PAK2Q13177 524 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 ZYXQ15942 572 aaKnown RBP17.81■□□□□ 0.44
COL18A1-203ENST00000359759 NELFBQ8WX92 580 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 CCDC89Q8N998 374 aa17.81■□□□□ 0.44
COL18A1-203ENST00000359759 NSFL1CQ9UNZ2 370 aaKnown RBP17.81■□□□□ 0.44
COL18A1-203ENST00000359759 SLC27A2O14975 620 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 MYCLP12524 364 aaPredicted RBP17.8■□□□□ 0.44
COL18A1-203ENST00000359759 DCUN1D2Q6PH85 259 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 CAPN12Q6ZSI9 719 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 MICAL1Q8TDZ2 1067 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 MSH6P52701 1360 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 SMIM24O75264 130 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 ALDH1L1O75891 902 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 TSC1Q92574 1164 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 STAMQ92783 540 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 KRT19P08727 400 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 ARHGAP44Q17R89 818 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 LONRF2Q1L5Z9 754 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 TSPYL6Q8N831 410 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 RLBP1P12271 317 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 RILPL1Q5EBL4 403 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 TTC19Q6DKK2 380 aaPredicted RBP17.8■□□□□ 0.44
COL18A1-203ENST00000359759 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
COL18A1-203ENST00000359759 MYL10Q9BUA6 226 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 ADKP55263 362 aaKnown RBP17.8■□□□□ 0.44
COL18A1-203ENST00000359759 KRT71Q3SY84 523 aa17.8■□□□□ 0.44
COL18A1-203ENST00000359759 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
COL18A1-203ENST00000359759 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.8■□□□□ 0.444e-6■■■■□ 20.2
COL18A1-203ENST00000359759 NSD2O96028 1365 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 GCKP35557 465 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 ATP1A2P50993 1020 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 B4DLN1 442 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 MRPL12P52815 198 aaKnown RBP17.79■□□□□ 0.44
COL18A1-203ENST00000359759 ANKRD20A3Q5VUR7 823 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 V9GY48 417 aaPredicted RBP17.79■□□□□ 0.44
COL18A1-203ENST00000359759 NCOA1Q15788 1441 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 GCNT3O95395 438 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 MAP2K2P36507 400 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 GNGT1P63211 74 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 HINFPQ9BQA5 517 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 TSPYL2Q9H2G4 693 aaPredicted RBP17.79■□□□□ 0.44
COL18A1-203ENST00000359759 SCAF11Q99590 1463 aaKnown RBP17.79■□□□□ 0.44
COL18A1-203ENST00000359759 PEX26Q7Z412 305 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 USH1CQ9Y6N9 552 aa17.79■□□□□ 0.44
COL18A1-203ENST00000359759 MAGEA1P43355 309 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms