RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 CPXCR1Q8N123 301 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 IGFBP4P22692 258 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 TDO2P48775 406 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 GPSM2P81274 684 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 RASA3Q14644 834 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 LRRFIP1Q32MZ4 808 aaKnown RBP4.55□□□□□ -1.68
SMC1B-201ENST00000357450 CLASRPQ8N2M8 674 aaKnown RBP4.55□□□□□ -1.68
SMC1B-201ENST00000357450 RILPL2Q969X0 211 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 CSRNP1Q96S65 589 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 PHOX2BQ99453 314 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 DEFB129Q9H1M3 183 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 GPRC5DQ9NZD1 345 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 AKAP2Q9Y2D5 859 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 ZHX2Q9Y6X8 837 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 ZNF541Q9H0D2 1346 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 SIP14410 1827 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 NFKBIEO00221 500 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 KDM4AO75164 1064 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 SLC17A8Q8NDX2 589 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 PIBF1Q8WXW3 757 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 NBPF3Q9H094 633 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 GREM2Q9H772 168 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 C1orf115Q9H7X2 142 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 MYOZ2Q9NPC6 264 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 TANC1Q9C0D5 1861 aa4.55□□□□□ -1.68
SMC1B-201ENST00000357450 ERVV-1B6SEH8 477 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 FOXP2O15409 715 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 ALDH1A1P00352 501 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 SLC3A2P08195 630 aaKnown RBP4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CYP2B6P20813 491 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CTSWP56202 376 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 NAA16Q6N069 864 aaPredicted RBP4.54□□□□□ -1.68
SMC1B-201ENST00000357450 BBXQ8WY36 941 aaPredicted RBP4.54□□□□□ -1.68
SMC1B-201ENST00000357450 THAP11Q96EK4 314 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 ERO1AQ96HE7 468 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 SCLT1Q96NL6 688 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CRAMP1Q96RY5 1269 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 HTATIP2Q9BUP3 242 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CPA4Q9UI42 421 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 RCAN3Q9UKA8 241 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 PRDM4Q9UKN5 801 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 KCNH4Q9UQ05 1017 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CHRNDQ07001 517 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 ZGPATQ8N5A5 531 aaKnown RBP4.54□□□□□ -1.68
SMC1B-201ENST00000357450 TSPYL6Q8N831 410 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 TRPM4Q8TD43 1214 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CDCA5Q96FF9 252 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 FUCA2Q9BTY2 467 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 IL1RAPL2Q9NP60 686 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 MAST3O60307 1309 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 MEGF6O75095 1541 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 NBPF26B4DH59 902 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 GRM8O00222 908 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 GSTO1P78417 241 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 HDAC1Q13547 482 aaPredicted RBP4.54□□□□□ -1.68
SMC1B-201ENST00000357450 NBPF9Q3BBW0 867 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 KIAA1211Q6ZU35 1233 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CTU1Q7Z7A3 348 aaKnown RBP4.54□□□□□ -1.68
SMC1B-201ENST00000357450 NCAPG2Q86XI2 1143 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 MIGA1Q8NAN2 632 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 KLHDC4Q8TBB5 520 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 FAM53CQ9NYF3 392 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 SPTBN2O15020 2390 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 KDM6AO15550 1401 aaPredicted RBP4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CYP7A1P22680 504 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 MAP3K12Q12852 859 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 CHST3Q7LGC8 479 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 AMIGO3Q86WK7 504 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 ZBTB38Q8NAP3 1195 aaPredicted RBP4.54□□□□□ -1.68
SMC1B-201ENST00000357450 C8orf58Q8NAV2 365 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 TBC1D22AQ8WUA7 517 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 KAZALD1Q96I82 304 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 SLC4A9Q96Q91 983 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 MCOLN1Q9GZU1 580 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 HOMER2Q9NSB8 354 aa4.54□□□□□ -1.68
SMC1B-201ENST00000357450 BRWD3Q6RI45 1802 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 SP3Q02447 781 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 TMEM132AQ24JP5 1023 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 RSBN1LQ6PCB5 846 aaPredicted RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 ZBTB33Q86T24 672 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 AACSQ86V21 672 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 ZNF444Q8N0Y2 327 aaPredicted RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 LINS1Q8NG48 757 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 TBC1D16Q8TBP0 767 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 CCDC43Q96MW1 224 aaKnown RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 METTL22Q9BUU2 404 aaPredicted RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 CCDC8Q9H0W5 538 aaPredicted RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 SLC5A4Q9NY91 659 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 COL11A2P13942 1736 aaPredicted RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 MVPQ14764 893 aaKnown RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 NBPF10Q6P3W6 841 aaKnown RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 ANKRD13AQ8IZ07 590 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 WDR66Q8TBY9 1149 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 PDLIM2Q96JY6 352 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 COA1Q9GZY4 146 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 IFT57Q9NWB7 429 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 ZMYND8Q9ULU4 1186 aaPredicted RBP4.53□□□□□ -1.68
SMC1B-201ENST00000357450 RLFQ13129 1914 aa4.53□□□□□ -1.68
SMC1B-201ENST00000357450 C5orf42Q9H799 3197 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms