RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 AXDND1Q5T1B0 1012 aaPredicted RBP18.05■□□□□ 0.48
MBD1-205ENST00000353909 FANCBQ8NB91 859 aa18.05■□□□□ 0.48
MBD1-205ENST00000353909 ESR2Q92731 530 aa18.05■□□□□ 0.48
MBD1-205ENST00000353909 FBXW7Q969H0 707 aa18.05■□□□□ 0.48
MBD1-205ENST00000353909 BRIP1Q9BX63 1249 aa18.05■□□□□ 0.48
MBD1-205ENST00000353909 DCP1AQ9NPI6 582 aaPredicted RBP18.05■□□□□ 0.48
MBD1-205ENST00000353909 NMT2O60551 498 aa18.05■□□□□ 0.48
MBD1-205ENST00000353909 YEATS4O95619 227 aa18.05■□□□□ 0.48
MBD1-205ENST00000353909 GRAPQ13588 217 aa18.05■□□□□ 0.48
MBD1-205ENST00000353909 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
MBD1-205ENST00000353909 CERKQ8TCT0 537 aa18.05■□□□□ 0.48
MBD1-205ENST00000353909 QTRT2Q9H974 415 aaKnown RBP18.05■□□□□ 0.48
MBD1-205ENST00000353909 hCG_1642624A0A1W2PR95 340 aa18.04■□□□□ 0.48
MBD1-205ENST00000353909 BTBD18B2RXH4 712 aa18.04■□□□□ 0.48
MBD1-205ENST00000353909 SPC24Q8NBT2 197 aa18.04■□□□□ 0.48
MBD1-205ENST00000353909 KCNG4Q8TDN1 519 aa18.04■□□□□ 0.48
MBD1-205ENST00000353909 MROH7-TTC4A0A0A0MT08 1334 aa18.04■□□□□ 0.48
MBD1-205ENST00000353909 TRIM37O94972 964 aa18.04■□□□□ 0.48
MBD1-205ENST00000353909 GNL2Q13823 731 aaKnown RBP18.04■□□□□ 0.48
MBD1-205ENST00000353909 UBE2Q2Q8WVN8 375 aa18.04■□□□□ 0.48
MBD1-205ENST00000353909 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.04■□□□□ 0.48
MBD1-205ENST00000353909 U2AF2P26368 475 aaKnown RBP eCLIP18.04■□□□□ 0.483e-7■■□□□ 12.2
MBD1-205ENST00000353909 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
MBD1-205ENST00000353909 SHISA4Q96DD7 197 aa18.04■□□□□ 0.48
MBD1-205ENST00000353909 ZSCAN10Q96SZ4 725 aaPredicted RBP18.04■□□□□ 0.48
MBD1-205ENST00000353909 DIXDC1Q155Q3 683 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 DUOX1Q9NRD9 1551 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 A0A1W2PQ27 194 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 A0A1W2PQ64 194 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 A0A1W2PQD8 194 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 TRIM29Q14134 588 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 SLC39A14Q15043 492 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 FAM47AQ5JRC9 791 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 MAP3K14Q99558 947 aa18.03■□□□□ 0.48
MBD1-205ENST00000353909 PTPAQ15257 358 aa18.02■□□□□ 0.48
MBD1-205ENST00000353909 UBR3Q6ZT12 1888 aa18.02■□□□□ 0.48
MBD1-205ENST00000353909 NID2Q14112 1375 aa18.02■□□□□ 0.48
MBD1-205ENST00000353909 STK36Q9NRP7 1315 aa18.02■□□□□ 0.48
MBD1-205ENST00000353909 ZNF500O60304 480 aaPredicted RBP18.02■□□□□ 0.47
MBD1-205ENST00000353909 GPSM2P81274 684 aa18.02■□□□□ 0.47
MBD1-205ENST00000353909 NR5A1Q13285 461 aa18.02■□□□□ 0.47
MBD1-205ENST00000353909 TMTC2Q8N394 836 aa18.02■□□□□ 0.47
MBD1-205ENST00000353909 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.47
MBD1-205ENST00000353909 CLIC6Q96NY7 704 aa18.02■□□□□ 0.47
MBD1-205ENST00000353909 SDF4Q9BRK5 362 aa18.02■□□□□ 0.47
MBD1-205ENST00000353909 SERPINB2P05120 415 aa18.01■□□□□ 0.47
MBD1-205ENST00000353909 USP17L8P0C7I0 530 aa18.01■□□□□ 0.47
MBD1-205ENST00000353909 DZIP1Q86YF9 867 aaKnown RBP18.01■□□□□ 0.47
MBD1-205ENST00000353909 DIS3L2Q8IYB7 885 aaKnown RBP18.01■□□□□ 0.47
MBD1-205ENST00000353909 OXER1Q8TDS5 423 aa18.01■□□□□ 0.47
MBD1-205ENST00000353909 PDS5AQ29RF7 1337 aaKnown RBP18.01■□□□□ 0.47
MBD1-205ENST00000353909 PLEKHA8P1O95397 391 aa18.01■□□□□ 0.47
MBD1-205ENST00000353909 FGRP09769 529 aa18.01■□□□□ 0.47
MBD1-205ENST00000353909 C17orf53Q8N3J3 647 aaPredicted RBP18.01■□□□□ 0.47
MBD1-205ENST00000353909 CRNKL1Q9BZJ0 848 aaKnown RBP18.01■□□□□ 0.47
MBD1-205ENST00000353909 MMP1P03956 469 aa18■□□□□ 0.47
MBD1-205ENST00000353909 PFKFB1P16118 471 aa18■□□□□ 0.47
MBD1-205ENST00000353909 TOB1P50616 345 aaPredicted RBP18■□□□□ 0.47
MBD1-205ENST00000353909 IQCB1Q15051 598 aa18■□□□□ 0.47
MBD1-205ENST00000353909 IFIT1BQ5T764 474 aaKnown RBP18■□□□□ 0.47
MBD1-205ENST00000353909 TRIM22Q8IYM9 498 aa18■□□□□ 0.47
MBD1-205ENST00000353909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18■□□□□ 0.47
MBD1-205ENST00000353909 CTAGE5O15320 804 aa18■□□□□ 0.47
MBD1-205ENST00000353909 DDR1Q08345 913 aa18■□□□□ 0.47
MBD1-205ENST00000353909 SHC4Q6S5L8 630 aa18■□□□□ 0.47
MBD1-205ENST00000353909 PROM2Q8N271 834 aa18■□□□□ 0.47
MBD1-205ENST00000353909 RPGRQ92834 1020 aaKnown RBP18■□□□□ 0.47
MBD1-205ENST00000353909 MTA3Q9BTC8 594 aa18■□□□□ 0.47
MBD1-205ENST00000353909 XDHP47989 1333 aa18■□□□□ 0.47
MBD1-205ENST00000353909 CCDC88AQ3V6T2 1871 aa18■□□□□ 0.47
MBD1-205ENST00000353909 ZNF202O95125 648 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 TROAPQ12815 778 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 NOSTRINQ8IVI9 506 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 TDRD7Q8NHU6 1098 aaKnown RBP17.99■□□□□ 0.47
MBD1-205ENST00000353909 MCM9Q9NXL9 1143 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 LEMD3Q9Y2U8 911 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 DEXIO95424 95 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 ADRA2BP18089 450 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 FUT2Q10981 343 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 CRY2Q49AN0 593 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 SPECC1Q5M775 1068 aa17.99■□□□□ 0.47
MBD1-205ENST00000353909 SH3RF3Q8TEJ3 882 aaPredicted RBP17.99■□□□□ 0.47
MBD1-205ENST00000353909 MYH6P13533 1939 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 LDHBP07195 334 aaKnown RBP17.98■□□□□ 0.47
MBD1-205ENST00000353909 CMA1P23946 247 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 PKN1Q16512 942 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 STX1AQ16623 288 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 VPS54Q9P1Q0 977 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 FAM205CA6NFA0 338 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 BIN1O00499 593 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 UFL1O94874 794 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 GRIN1Q05586 938 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 DYNLL2Q96FJ2 89 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 KCNF1Q9H3M0 494 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 ATP8A2Q9NTI2 1148 aa17.98■□□□□ 0.47
MBD1-205ENST00000353909 ATP2B1P20020 1258 aa17.97■□□□□ 0.47
MBD1-205ENST00000353909 RGS22Q8NE09 1264 aa17.97■□□□□ 0.47
MBD1-205ENST00000353909 TRIM5Q9C035 493 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms