RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 NUP58Q9BVL2 599 aa25.76■■□□□ 1.71
NPAS3-201ENST00000346562 ZEB2O60315 1214 aa25.76■■□□□ 1.71
NPAS3-201ENST00000346562 ZYXQ15942 572 aaKnown RBP25.76■■□□□ 1.71
NPAS3-201ENST00000346562 HACE1Q8IYU2 909 aa25.76■■□□□ 1.71
NPAS3-201ENST00000346562 GIPC1O14908 333 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 NONOQ15233 471 aaKnown RBP eCLIP25.75■■□□□ 1.71
NPAS3-201ENST00000346562 HDXQ7Z353 690 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 SLC1A4P43007 532 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 PRPF31Q8WWY3 499 aaKnown RBP25.75■■□□□ 1.71
NPAS3-201ENST00000346562 APPBP2Q92624 585 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 SYNRGQ9UMZ2 1314 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 A0A1B0GVL5 298 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 IGSF22Q8N9C0 903 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 ZKSCAN5Q9Y2L8 839 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 TTC38Q5R3I4 469 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 ANO1Q5XXA6 986 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 PLEKHM2Q8IWE5 1019 aa25.75■■□□□ 1.71
NPAS3-201ENST00000346562 TTF2Q9UNY4 1162 aaKnown RBP25.75■■□□□ 1.71
NPAS3-201ENST00000346562 DDX39AO00148 427 aaKnown RBP25.74■■□□□ 1.71
NPAS3-201ENST00000346562 BIRC2Q13490 618 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 TAOK1Q7L7X3 1001 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 RPUSD2Q8IZ73 545 aaKnown RBP25.74■■□□□ 1.71
NPAS3-201ENST00000346562 STMN2Q93045 179 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 DNM3Q9UQ16 869 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 TUBB2AQ13885 445 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 SRGAP1Q7Z6B7 1085 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 TUBB2BQ9BVA1 445 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 PPP2R5BQ15173 497 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 KCNG1Q9UIX4 513 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 V9GY48 417 aaPredicted RBP25.74■■□□□ 1.71
NPAS3-201ENST00000346562 PPFIBP2Q8ND30 876 aa25.74■■□□□ 1.71
NPAS3-201ENST00000346562 ZNF790Q6PG37 636 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 NIM1KQ8IY84 436 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 PAK1Q13153 545 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 CSGALNACT2Q8N6G5 542 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 AATFQ9NY61 560 aaKnown RBP eCLIP25.73■■□□□ 1.71
NPAS3-201ENST00000346562 KCNH3Q9ULD8 1083 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 GINS2Q9Y248 185 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 MROH5Q6ZUA9 1318 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 LACTBP83111 547 aaPredicted RBP25.73■■□□□ 1.71
NPAS3-201ENST00000346562 ANGEL1Q9UNK9 670 aaKnown RBP25.73■■□□□ 1.71
NPAS3-201ENST00000346562 CUTAO60888 179 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 MICALL1Q8N3F8 863 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 TSPYL6Q8N831 410 aa25.73■■□□□ 1.71
NPAS3-201ENST00000346562 SYCP2Q9BX26 1530 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 SLC27A2O14975 620 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 SNX29Q8TEQ0 813 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 NAPGQ99747 312 aaPredicted RBP25.72■■□□□ 1.71
NPAS3-201ENST00000346562 SMC5Q8IY18 1101 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 SLC5A4Q9NY91 659 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 AOX1Q06278 1338 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.72■■□□□ 1.71
NPAS3-201ENST00000346562 PRPF6O94906 941 aaKnown RBP25.72■■□□□ 1.71
NPAS3-201ENST00000346562 P4HA1P13674 534 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 HSPA1LP34931 641 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 YWHAEP62258 255 aaKnown RBP25.72■■□□□ 1.71
NPAS3-201ENST00000346562 LPIN2Q92539 896 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 PPANQ9NQ55 473 aaKnown RBP25.72■■□□□ 1.71
NPAS3-201ENST00000346562 LRWD1Q9UFC0 647 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 PRAG1Q86YV5 1406 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 CARD10Q9BWT7 1032 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 SWAP70Q9UH65 585 aa25.72■■□□□ 1.71
NPAS3-201ENST00000346562 PRIM1P49642 420 aaKnown RBP25.71■■□□□ 1.71
NPAS3-201ENST00000346562 ZBTB24O43167 697 aaPredicted RBP25.71■■□□□ 1.71
NPAS3-201ENST00000346562 IRX3P78415 501 aaPredicted RBP25.71■■□□□ 1.71
NPAS3-201ENST00000346562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.71■■□□□ 1.71
NPAS3-201ENST00000346562 MYCT1Q8N699 235 aa25.71■■□□□ 1.71
NPAS3-201ENST00000346562 GSDMBQ8TAX9 411 aa25.71■■□□□ 1.71
NPAS3-201ENST00000346562 SPOUT1Q5T280 376 aaKnown RBP25.71■■□□□ 1.71
NPAS3-201ENST00000346562 C8orf74Q6P047 294 aa25.71■■□□□ 1.71
NPAS3-201ENST00000346562 VPS16Q9H269 839 aa25.71■■□□□ 1.71
NPAS3-201ENST00000346562 HOXB7P09629 217 aa25.71■■□□□ 1.71
NPAS3-201ENST00000346562 DNAJC21Q5F1R6 531 aaKnown RBP25.71■■□□□ 1.71
NPAS3-201ENST00000346562 IBTKQ9P2D0 1353 aaPredicted RBP25.71■■□□□ 1.71
NPAS3-201ENST00000346562 ALDH1B1P30837 517 aa25.7■■□□□ 1.71
NPAS3-201ENST00000346562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.7■■□□□ 1.71
NPAS3-201ENST00000346562 BCRP11274 1271 aa25.7■■□□□ 1.7
NPAS3-201ENST00000346562 CALCRLQ16602 461 aa25.7■■□□□ 1.7
NPAS3-201ENST00000346562 AS3MTQ9HBK9 375 aa25.7■■□□□ 1.7
NPAS3-201ENST00000346562 DCUN1D2Q6PH85 259 aa25.7■■□□□ 1.7
NPAS3-201ENST00000346562 GPAA1O43292 621 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 TBC1D22AQ8WUA7 517 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 CCDC94Q9BW85 323 aaPredicted RBP25.69■■□□□ 1.7
NPAS3-201ENST00000346562 USP26Q9BXU7 913 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 KRT19P08727 400 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 PPP2R3AQ06190 1150 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 USH1GQ495M9 461 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 SLC9C1Q4G0N8 1177 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 CROCCP2Q86T23 111 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 NLRX1Q86UT6 975 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 CACYBPQ9HB71 228 aaKnown RBP25.69■■□□□ 1.7
NPAS3-201ENST00000346562 CTTNBP2NLQ9P2B4 639 aa25.69■■□□□ 1.7
NPAS3-201ENST00000346562 GIGYF1O75420 1035 aaPredicted RBP25.68■■□□□ 1.7
NPAS3-201ENST00000346562 MAP7Q14244 749 aa25.68■■□□□ 1.7
NPAS3-201ENST00000346562 MAEAQ7L5Y9 396 aa25.68■■□□□ 1.7
NPAS3-201ENST00000346562 SYCE1Q8N0S2 351 aa25.68■■□□□ 1.7
NPAS3-201ENST00000346562 VIMP08670 466 aaKnown RBP25.68■■□□□ 1.7
NPAS3-201ENST00000346562 CUL4BQ13620 913 aa25.68■■□□□ 1.7
NPAS3-201ENST00000346562 RIOK1Q9BRS2 568 aaKnown RBP25.68■■□□□ 1.7
NPAS3-201ENST00000346562 SBNO1A3KN83 1393 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms