RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ARHGAP39Q9C0H5 1083 aa20.85■□□□□ 0.93
BRCC3-202ENST00000340647 PTPN22Q9Y2R2 807 aa20.85■□□□□ 0.93
BRCC3-202ENST00000340647 ZHX2Q9Y6X8 837 aa20.85■□□□□ 0.93
BRCC3-202ENST00000340647 LOC285556D6RIA3 1793 aa20.85■□□□□ 0.93
BRCC3-202ENST00000340647 FLT1P17948 1338 aa20.84■□□□□ 0.93
BRCC3-202ENST00000340647 A0A0G2JLL6 359 aaPredicted RBP20.84■□□□□ 0.93
BRCC3-202ENST00000340647 APBB1O00213 710 aa20.84■□□□□ 0.93
BRCC3-202ENST00000340647 CXCL11O14625 94 aa20.84■□□□□ 0.93
BRCC3-202ENST00000340647 PRRT2Q7Z6L0 340 aaPredicted RBP20.84■□□□□ 0.93
BRCC3-202ENST00000340647 METTL16Q86W50 562 aaKnown RBP20.84■□□□□ 0.93
BRCC3-202ENST00000340647 KIF1BPQ96EK5 621 aa20.84■□□□□ 0.93
BRCC3-202ENST00000340647 RBBP6Q7Z6E9 1792 aaKnown RBP20.84■□□□□ 0.93
BRCC3-202ENST00000340647 MYH7P12883 1935 aa20.83■□□□□ 0.93
BRCC3-202ENST00000340647 PDHXO00330 501 aa20.83■□□□□ 0.93
BRCC3-202ENST00000340647 IGSF3O75054 1194 aa20.83■□□□□ 0.93
BRCC3-202ENST00000340647 CYP7A1P22680 504 aa20.83■□□□□ 0.93
BRCC3-202ENST00000340647 SHROOM1Q2M3G4 852 aaPredicted RBP20.83■□□□□ 0.93
BRCC3-202ENST00000340647 HSP90AB4PQ58FF6 505 aa20.83■□□□□ 0.93
BRCC3-202ENST00000340647 MAPKAPK5Q8IW41 473 aa20.83■□□□□ 0.93
BRCC3-202ENST00000340647 DOCK3Q8IZD9 2030 aa20.83■□□□□ 0.92
BRCC3-202ENST00000340647 IDH1O75874 414 aaKnown RBP20.82■□□□□ 0.92
BRCC3-202ENST00000340647 MAGEB6Q8N7X4 407 aa20.82■□□□□ 0.92
BRCC3-202ENST00000340647 EDC3Q96F86 508 aaKnown RBP20.82■□□□□ 0.92
BRCC3-202ENST00000340647 EFCC1Q9HA90 598 aa20.82■□□□□ 0.92
BRCC3-202ENST00000340647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.82■□□□□ 0.92
BRCC3-202ENST00000340647 HMMRO75330 724 aa20.81■□□□□ 0.92
BRCC3-202ENST00000340647 BAG3O95817 575 aa20.81■□□□□ 0.92
BRCC3-202ENST00000340647 MIGA1Q8NAN2 632 aa20.81■□□□□ 0.92
BRCC3-202ENST00000340647 RIOK1Q9BRS2 568 aaKnown RBP20.81■□□□□ 0.92
BRCC3-202ENST00000340647 CPA4Q9UI42 421 aa20.81■□□□□ 0.92
BRCC3-202ENST00000340647 PALD1Q9ULE6 856 aa20.81■□□□□ 0.92
BRCC3-202ENST00000340647 KIAA0100Q14667 2235 aaKnown RBP20.81■□□□□ 0.92
BRCC3-202ENST00000340647 RAB11FIP3O75154 756 aa20.8■□□□□ 0.92
BRCC3-202ENST00000340647 CAP2P40123 477 aa20.8■□□□□ 0.92
BRCC3-202ENST00000340647 LACTBP83111 547 aaPredicted RBP20.8■□□□□ 0.92
BRCC3-202ENST00000340647 CLASRPQ8N2M8 674 aaKnown RBP20.8■□□□□ 0.92
BRCC3-202ENST00000340647 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.8■□□□□ 0.92
BRCC3-202ENST00000340647 PICK1Q9NRD5 415 aa20.8■□□□□ 0.92
BRCC3-202ENST00000340647 NAV1Q8NEY1 1877 aa20.79■□□□□ 0.92
BRCC3-202ENST00000340647 TCRBV5S4A2TA0A5A2 114 aa20.79■□□□□ 0.92
BRCC3-202ENST00000340647 CYP2C8P10632 490 aa20.79■□□□□ 0.92
BRCC3-202ENST00000340647 BCRP11274 1271 aa20.79■□□□□ 0.92
BRCC3-202ENST00000340647 PLCG2P16885 1265 aa20.79■□□□□ 0.92
BRCC3-202ENST00000340647 SLFNL1Q499Z3 407 aa20.79■□□□□ 0.92
BRCC3-202ENST00000340647 PI4KBQ9UBF8 816 aa20.79■□□□□ 0.92
BRCC3-202ENST00000340647 TRIM75PA6NK02 468 aa20.78■□□□□ 0.92
BRCC3-202ENST00000340647 SMARCA5O60264 1052 aaPredicted RBP20.78■□□□□ 0.92
BRCC3-202ENST00000340647 CHGBP05060 677 aa20.78■□□□□ 0.92
BRCC3-202ENST00000340647 DHX36Q9H2U1 1008 aaKnown RBP20.78■□□□□ 0.92
BRCC3-202ENST00000340647 SAP30BPQ9UHR5 308 aaKnown RBP20.78■□□□□ 0.92
BRCC3-202ENST00000340647 HERC5Q9UII4 1024 aaKnown RBP20.78■□□□□ 0.92
BRCC3-202ENST00000340647 BAZ2AQ9UIF9 1905 aaKnown RBP20.77■□□□□ 0.92
BRCC3-202ENST00000340647 EVX2Q03828 476 aa20.77■□□□□ 0.92
BRCC3-202ENST00000340647 TREML2Q5T2D2 321 aa20.77■□□□□ 0.92
BRCC3-202ENST00000340647 ARMC5Q96C12 935 aa20.77■□□□□ 0.92
BRCC3-202ENST00000340647 NOL10Q9BSC4 688 aaKnown RBP20.77■□□□□ 0.92
BRCC3-202ENST00000340647 PTCH2Q9Y6C5 1203 aa20.77■□□□□ 0.92
BRCC3-202ENST00000340647 POTEFA5A3E0 1075 aa20.76■□□□□ 0.91
BRCC3-202ENST00000340647 PDE6AP16499 860 aa20.76■□□□□ 0.91
BRCC3-202ENST00000340647 MAP3K12Q12852 859 aa20.76■□□□□ 0.91
BRCC3-202ENST00000340647 SPP2Q13103 211 aa20.76■□□□□ 0.91
BRCC3-202ENST00000340647 SLC4A8Q2Y0W8 1093 aa20.76■□□□□ 0.91
BRCC3-202ENST00000340647 TRIM47Q96LD4 638 aa20.76■□□□□ 0.91
BRCC3-202ENST00000340647 CHMP4BQ9H444 224 aaKnown RBP20.76■□□□□ 0.91
BRCC3-202ENST00000340647 PCDHB15Q9Y5E8 787 aa20.76■□□□□ 0.91
BRCC3-202ENST00000340647 GOLIM4O00461 696 aa20.75■□□□□ 0.91
BRCC3-202ENST00000340647 ECM2O94769 699 aaPredicted RBP20.75■□□□□ 0.91
BRCC3-202ENST00000340647 IFIT2P09913 472 aaKnown RBP20.75■□□□□ 0.91
BRCC3-202ENST00000340647 ATP5JP18859 108 aa20.75■□□□□ 0.91
BRCC3-202ENST00000340647 FASTKD5Q7L8L6 764 aaKnown RBP20.75■□□□□ 0.91
BRCC3-202ENST00000340647 FOXP4Q8IVH2 680 aaPredicted RBP20.75■□□□□ 0.91
BRCC3-202ENST00000340647 BCL11AQ9H165 835 aa20.75■□□□□ 0.91
BRCC3-202ENST00000340647 BOLA2Q9H3K6 86 aa20.75■□□□□ 0.91
BRCC3-202ENST00000340647 DCTPP1Q9H773 170 aa20.75■□□□□ 0.91
BRCC3-202ENST00000340647 GADL1Q6ZQY3 521 aa20.74■□□□□ 0.91
BRCC3-202ENST00000340647 ZNF280CQ8ND82 737 aa20.74■□□□□ 0.91
BRCC3-202ENST00000340647 DNAJC2Q99543 621 aaKnown RBP20.74■□□□□ 0.91
BRCC3-202ENST00000340647 SLC45A1Q9Y2W3 748 aa20.74■□□□□ 0.91
BRCC3-202ENST00000340647 ZNF532Q9HCE3 1301 aa20.74■□□□□ 0.91
BRCC3-202ENST00000340647 SH3D19Q5HYK7 790 aa20.73■□□□□ 0.91
BRCC3-202ENST00000340647 SLC9C2Q5TAH2 1124 aa20.73■□□□□ 0.91
BRCC3-202ENST00000340647 HAUS7Q99871 368 aa20.73■□□□□ 0.91
BRCC3-202ENST00000340647 AGTPBP1Q9UPW5 1226 aa20.73■□□□□ 0.91
BRCC3-202ENST00000340647 USP17L5A8MUK1 530 aa20.72■□□□□ 0.91
BRCC3-202ENST00000340647 GDF11O95390 407 aa20.72■□□□□ 0.91
BRCC3-202ENST00000340647 PLCD1P51178 756 aa20.72■□□□□ 0.91
BRCC3-202ENST00000340647 TTF1Q15361 905 aaPredicted RBP20.72■□□□□ 0.91
BRCC3-202ENST00000340647 TATDN1Q6P1N9 297 aa20.72■□□□□ 0.91
BRCC3-202ENST00000340647 TMED8Q6PL24 325 aaPredicted RBP20.72■□□□□ 0.91
BRCC3-202ENST00000340647 ZNF333Q96JL9 665 aa20.72■□□□□ 0.91
BRCC3-202ENST00000340647 PARK7Q99497 189 aaKnown RBP20.72■□□□□ 0.91
BRCC3-202ENST00000340647 WDR18Q9BV38 432 aa20.72■□□□□ 0.91
BRCC3-202ENST00000340647 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
BRCC3-202ENST00000340647 PLXNB2O15031 1838 aa20.71■□□□□ 0.91
BRCC3-202ENST00000340647 PSMC4P43686 418 aa20.71■□□□□ 0.91
BRCC3-202ENST00000340647 HMGCS2P54868 508 aa20.71■□□□□ 0.91
BRCC3-202ENST00000340647 LCORLQ8N3X6 602 aa20.71■□□□□ 0.91
BRCC3-202ENST00000340647 PAG1Q9NWQ8 432 aa20.71■□□□□ 0.91
BRCC3-202ENST00000340647 MAGEB6P1A0A0J9YX57 407 aa20.7■□□□□ 0.9
BRCC3-202ENST00000340647 SMIM22K7EJ46 135 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms