RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 CCDC93Q567U6 631 aa14.04□□□□□ -0.16
BRPF3-201ENST00000339717 NSMCE1Q8WV22 266 aa14.04□□□□□ -0.16
BRPF3-201ENST00000339717 NRDE2Q9H7Z3 1164 aa14.04□□□□□ -0.16
BRPF3-201ENST00000339717 TOP2BQ02880 1626 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 SARM1Q6SZW1 724 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 APBB1IPQ7Z5R6 666 aaPredicted RBP14.03□□□□□ -0.16
BRPF3-201ENST00000339717 XAB2Q9HCS7 855 aaKnown RBP14.03□□□□□ -0.16
BRPF3-201ENST00000339717 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
BRPF3-201ENST00000339717 BCAP29Q9UHQ4 241 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 MCF2LO15068 1137 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 DIAPH2O60879 1101 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 NLRP12P59046 1061 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 PHEXP78562 749 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 TRPC3Q13507 836 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.03□□□□□ -0.16
BRPF3-201ENST00000339717 FAM200BP0CF97 657 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 CFAP221Q4G0U5 840 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 LRRC31Q6UY01 552 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 A1CFQ9NQ94 594 aaKnown RBP14.03□□□□□ -0.16
BRPF3-201ENST00000339717 SERPINA10Q9UK55 444 aa14.03□□□□□ -0.16
BRPF3-201ENST00000339717 MYO1FO00160 1098 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 EIF2S2P20042 333 aaKnown RBP14.02□□□□□ -0.16
BRPF3-201ENST00000339717 RNASELQ05823 741 aaKnown RBP14.02□□□□□ -0.16
BRPF3-201ENST00000339717 TAF7Q15545 349 aaPredicted RBP14.02□□□□□ -0.16
BRPF3-201ENST00000339717 KBTBD12Q3ZCT8 623 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 LCMT1Q9UIC8 334 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 INTUQ9ULD6 942 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 ATP5HO75947 161 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 CPP00450 1065 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 MAGEA8P43361 318 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 ESRRGP62508 458 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 PDCLQ13371 301 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 ZC3H18Q86VM9 953 aaKnown RBP14.02□□□□□ -0.16
BRPF3-201ENST00000339717 LEO1Q8WVC0 666 aaPredicted RBP14.02□□□□□ -0.16
BRPF3-201ENST00000339717 TEKT1Q969V4 418 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 HMG20BQ9P0W2 317 aa14.02□□□□□ -0.16
BRPF3-201ENST00000339717 GSCP56915 257 aaPredicted RBP14.02□□□□□ -0.17
BRPF3-201ENST00000339717 KCTD16Q68DU8 428 aa14.02□□□□□ -0.17
BRPF3-201ENST00000339717 NLRP14Q86W24 1093 aa14.02□□□□□ -0.17
BRPF3-201ENST00000339717 CXorf38Q8TB03 319 aa14.02□□□□□ -0.17
BRPF3-201ENST00000339717 EMBQ6PCB8 327 aa14.02□□□□□ -0.17
BRPF3-201ENST00000339717 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.17
BRPF3-201ENST00000339717 DHX58Q96C10 678 aa14.02□□□□□ -0.17
BRPF3-201ENST00000339717 EPSTI1Q96J88 318 aa14.02□□□□□ -0.17
BRPF3-201ENST00000339717 NR1H4Q96RI1 486 aaPredicted RBP14.02□□□□□ -0.17
BRPF3-201ENST00000339717 CYB5D1Q6P9G0 228 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 MTHFSP49914 203 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 HS2ST1Q7LGA3 356 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 IL17RAQ96F46 866 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 FAM81BQ96LP2 452 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 PDP2Q9P2J9 529 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 ACTN4O43707 911 aaKnown RBP14.01□□□□□ -0.17
BRPF3-201ENST00000339717 S100BP04271 92 aaPredicted RBP14.01□□□□□ -0.17
BRPF3-201ENST00000339717 KRT4P19013 534 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 MTIF2P46199 727 aaKnown RBP14.01□□□□□ -0.17
BRPF3-201ENST00000339717 IQCB1Q15051 598 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 VPS53Q5VIR6 699 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 SH2D4AQ9H788 454 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
BRPF3-201ENST00000339717 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.17
BRPF3-201ENST00000339717 KCNB1Q14721 858 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 TMEM154Q6P9G4 183 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 TUBB6Q9BUF5 446 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 SPZ1Q9BXG8 430 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 NUF2Q9BZD4 464 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 FTOQ9C0B1 505 aaKnown RBP eCLIP14.01□□□□□ -0.17
BRPF3-201ENST00000339717 RMND1Q9NWS8 449 aa14.01□□□□□ -0.17
BRPF3-201ENST00000339717 MAN1A2O60476 641 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 KCNJ6P48051 423 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 MTX1Q13505 466 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 PRR16Q569H4 304 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 KDM1AO60341 852 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 PDE1BQ01064 536 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 ATP11CQ8NB49 1132 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 EZH1Q92800 747 aaPredicted RBP14□□□□□ -0.17
BRPF3-201ENST00000339717 BHMTQ93088 406 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 RGS16O15492 202 aaPredicted RBP14□□□□□ -0.17
BRPF3-201ENST00000339717 GNAT2P19087 354 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 MTA1Q13330 715 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 TMEM87AQ8NBN3 555 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 ATP2A3Q93084 1043 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 LARP6Q9BRS8 491 aaKnown RBP14□□□□□ -0.17
BRPF3-201ENST00000339717 HAUS4Q9H6D7 363 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 TMEM165Q9HC07 324 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 HAUS2Q9NVX0 235 aa14□□□□□ -0.17
BRPF3-201ENST00000339717 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 GMNCA6NCL1 334 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 AK2P54819 239 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 HNRNPLLQ8WVV9 542 aaKnown RBP13.99□□□□□ -0.17
BRPF3-201ENST00000339717 CCDC43Q96MW1 224 aaKnown RBP13.99□□□□□ -0.17
BRPF3-201ENST00000339717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.99□□□□□ -0.17
BRPF3-201ENST00000339717 IPO5O00410 1097 aaKnown RBP13.99□□□□□ -0.17
BRPF3-201ENST00000339717 IKQ13123 557 aaPredicted RBP13.99□□□□□ -0.17
BRPF3-201ENST00000339717 PKP1Q13835 747 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 HOMER2Q9NSB8 354 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 WWC3Q9ULE0 1092 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 SPTLC2O15270 562 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 RPS6KA5O75582 802 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 IMPDH2P12268 514 aa13.99□□□□□ -0.17
BRPF3-201ENST00000339717 CCDC144CPQ8IYA2 1237 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms