RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 ENAHQ8N8S7 591 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 CHD4Q14839 1912 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 BAG3O95817 575 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 LIFRP42702 1097 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 SGMS1Q86VZ5 419 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 IQCA1Q86XH1 822 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 FLAD1Q8NFF5 587 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 FBXO18Q8NFZ0 1043 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 PGBD1Q96JS3 809 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 ZSCAN10Q96SZ4 725 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 KCNJ14Q9UNX9 436 aa11.76□□□□□ -0.53
ARHGEF3-202ENST00000338458 CKAP2LQ8IYA6 745 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 ATP2B1P20020 1258 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 ME1P48163 572 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 PLCD1P51178 756 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 KRT40Q6A162 431 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 TEX11Q8IYF3 940 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 MASTLQ96GX5 879 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 MKNK2Q9HBH9 465 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 ATP8A2Q9NTI2 1148 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 DACT1Q9NYF0 836 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 H0YIN7 160 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 NTRK3Q16288 839 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 CCDC183Q5T5S1 534 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 CFAP45Q9UL16 551 aa11.75□□□□□ -0.53
ARHGEF3-202ENST00000338458 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 CDKL5O76039 1030 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 LDHCP07864 332 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 PDIA4P13667 645 aaKnown RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 IL1R1P14778 569 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 GSTO1P78417 241 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 FANCBQ8NB91 859 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 UTRNP46939 3433 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 MROH7-TTC4A0A0A0MT08 1334 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 TFAP4Q01664 338 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 TRIM29Q14134 588 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 ANAPC4Q9UJX5 808 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 CLIC4Q9Y696 253 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 PDS5AQ29RF7 1337 aaKnown RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 PDE4BQ07343 736 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 RTFDC1Q9BY42 306 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 TSPY26PQ9H489 355 aa11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 ARPP21Q9UBL0 812 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 TTF2Q9UNY4 1162 aaKnown RBP11.74□□□□□ -0.53
ARHGEF3-202ENST00000338458 USP17L3A6NCW0 530 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 USP17L4A6NCW7 530 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 NR1I2O75469 434 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 PLEKHA8P1O95397 391 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 SEC23AQ15436 765 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 USP17L1Q7RTZ2 530 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 CAMKK2Q96RR4 588 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 STK38Q15208 465 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 TRIM22Q8IYM9 498 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 CERS5Q8N5B7 392 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 ZNF396Q96N95 335 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 CCDC88AQ3V6T2 1871 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 ANKRD31Q8N7Z5 1873 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 SLURP2P0DP57 97 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 MARCKSP29966 332 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 CATIPQ7Z7H3 387 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 KIAA0825Q8IV33 1275 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 STX8Q9UNK0 236 aa11.73□□□□□ -0.53
ARHGEF3-202ENST00000338458 KIF23Q02241 960 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 AMOTL1Q8IY63 956 aa11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 PCDHAC2Q9Y5I4 1007 aa11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 RBM5P52756 815 aaKnown RBP eCLIP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 C12orf60Q5U649 245 aa11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 TMTC2Q8N394 836 aa11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 ANP32BQ92688 251 aaKnown RBP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 V9GY48 417 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 BTBD18B2RXH4 712 aa11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 CACNB3P54284 484 aa11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 AKAP17AQ02040 695 aaKnown RBP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 CCAR1Q8IX12 1150 aaKnown RBP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 NUP62CLQ9H1M0 184 aa11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 PPP1R1BQ9UD71 204 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF3-202ENST00000338458 C21orf2O43822 256 aa11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 TSPY3P0CV98 308 aa11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 TSPY8P0CW00 308 aa11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 RASGRP2Q7LDG7 609 aa11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 ZNF444Q8N0Y2 327 aaPredicted RBP11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 COA1Q9GZY4 146 aa11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 VPS54Q9P1Q0 977 aa11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 DAGLAQ9Y4D2 1042 aa11.71□□□□□ -0.53
ARHGEF3-202ENST00000338458 A0A087WWV3 80 aa11.71□□□□□ -0.54
ARHGEF3-202ENST00000338458 IFNAR1P17181 557 aa11.71□□□□□ -0.54
ARHGEF3-202ENST00000338458 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms