RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 PTPAQ15257 358 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 NT5DC1Q5TFE4 455 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 STRIP1Q5VSL9 837 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 CNNM4Q6P4Q7 775 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 CNTNAP5Q8WYK1 1306 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 TIGD1Q96MW7 591 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 DOCK5Q9H7D0 1870 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 PLCG2P16885 1265 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 PKN1Q16512 942 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 DACT2Q5SW24 774 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 PODNQ7Z5L7 613 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 SPATA20Q8TB22 786 aa6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 RBM46Q8TBY0 533 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 DNAJC2Q99543 621 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-201ENST00000337659 MAGEB6P1A0A0J9YX57 407 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 FOXR2Q6PJQ5 311 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 MAGEB6Q8N7X4 407 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 PHF20Q9BVI0 1012 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 FOXP1Q9H334 677 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 KCND1Q9NSA2 647 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 ZNF213O14771 459 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 TRAK2O60296 914 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 MBD4O95243 580 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 SLC4A3P48751 1232 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 GRM4Q14833 912 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 FBXO18Q8NFZ0 1043 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 WDR81Q562E7 1941 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 PRC1O43663 620 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 ZNF280AP59817 542 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 UVSSAQ2YD98 709 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 CT47A1Q5JQC4 288 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 PPP1R18Q6NYC8 613 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 SPZ1Q9BXG8 430 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 ZSWIM5Q9P217 1185 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 RBM27Q9P2N5 1060 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 GGA1Q9UJY5 639 aa6.31□□□□□ -1.4
PRPF4B-201ENST00000337659 FRMPD4Q14CM0 1322 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 CSPP1Q1MSJ5 1256 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 COBLL1Q53SF7 1204 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 GALNT17Q6IS24 598 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 SLF2Q8IX21 1173 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 SWAP70Q9UH65 585 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 PALM3A6NDB9 673 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 DHX16O60231 1041 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 VIL1P09327 827 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 APLP1P51693 650 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 SNW1Q13573 536 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 SLFNL1Q499Z3 407 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 SOGA3Q5TF21 947 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 TTLL5Q6EMB2 1281 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 CERS5Q8N5B7 392 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 SUPT20HQ8NEM7 779 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 SYTL4Q96C24 671 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 LZTS2Q9BRK4 669 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 NDUFB9Q9Y6M9 179 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 CNTNAP1P78357 1384 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 FLT1P17948 1338 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 GYG1P46976 350 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 KIF23Q02241 960 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 TAF7LQ5H9L4 462 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 PPP4R3BQ5MIZ7 849 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 CRYGNQ8WXF5 182 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 MBOAT7Q96N66 472 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 NEUROD6Q96NK8 337 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 UPF3BQ9BZI7 483 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 WTIPA6NIX2 430 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 CLK2P49760 499 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 LRSAM1Q6UWE0 723 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 CRACR2BQ8N4Y2 399 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 NEDD1Q8NHV4 660 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 KCNN1Q92952 543 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 SCAND2PQ9GZW5 306 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 IL17RBQ9NRM6 502 aa6.3□□□□□ -1.4
PRPF4B-201ENST00000337659 PTPDC1A2A3K4 754 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 KIF3CO14782 793 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 ENTPD3O75355 529 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 CDKL5O76039 1030 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 CAVIN2O95810 425 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 TMTC3Q6ZXV5 915 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 ENAHQ8N8S7 591 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 ZSCAN10Q96SZ4 725 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 NACAP1Q9BZK3 213 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 WDHD1O75717 1129 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 LDHCP07864 332 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 CDC27P30260 824 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 TRAPPC10P48553 1259 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 AXDND1Q5T1B0 1012 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 APOBEC3HQ6NTF7 200 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 BTNL9Q6UXG8 535 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 CNKSR1Q969H4 720 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 COL11A1P12107 1806 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 SLC35G1Q2M3R5 365 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 GMCL1P1Q8NEA9 526 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 CRNKL1Q9BZJ0 848 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 RIOX1Q9H6W3 641 aa6.29□□□□□ -1.4
PRPF4B-201ENST00000337659 MYO1BO43795 1136 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 SLC34A2O95436 690 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms