RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PHRF1Q9P1Y6 1649 aaKnown RBP18.53■□□□□ 0.56
UPK3B-202ENST00000334348 CTAGE9A4FU28 777 aa18.53■□□□□ 0.56
UPK3B-202ENST00000334348 EIF3CLB5ME19 914 aaKnown RBP18.53■□□□□ 0.56
UPK3B-202ENST00000334348 ATP5J2-PTCD1G3V325 749 aa18.53■□□□□ 0.56
UPK3B-202ENST00000334348 PTCD1O75127 700 aaKnown RBP18.53■□□□□ 0.56
UPK3B-202ENST00000334348 KIF4BQ2VIQ3 1234 aa18.53■□□□□ 0.56
UPK3B-202ENST00000334348 ZNF569Q5MCW4 686 aa18.53■□□□□ 0.56
UPK3B-202ENST00000334348 RASGRP2Q7LDG7 609 aa18.53■□□□□ 0.56
UPK3B-202ENST00000334348 EIF3CQ99613 913 aaKnown RBP18.53■□□□□ 0.56
UPK3B-202ENST00000334348 AKAP2Q9Y2D5 859 aa18.53■□□□□ 0.56
UPK3B-202ENST00000334348 ZFYP08048 801 aaPredicted RBP18.52■□□□□ 0.56
UPK3B-202ENST00000334348 VSNL1P62760 191 aa18.52■□□□□ 0.56
UPK3B-202ENST00000334348 TTC31Q49AM3 519 aaPredicted RBP18.52■□□□□ 0.56
UPK3B-202ENST00000334348 TRMT44Q8IYL2 757 aaKnown RBP18.52■□□□□ 0.56
UPK3B-202ENST00000334348 ZFP91Q96JP5 570 aaPredicted RBP18.52■□□□□ 0.56
UPK3B-202ENST00000334348 MED15Q96RN5 788 aa18.52■□□□□ 0.56
UPK3B-202ENST00000334348 ACBD3Q9H3P7 528 aa18.52■□□□□ 0.56
UPK3B-202ENST00000334348 MED4Q9NPJ6 270 aa18.52■□□□□ 0.56
UPK3B-202ENST00000334348 SAMSN1Q9NSI8 373 aaKnown RBP18.52■□□□□ 0.56
UPK3B-202ENST00000334348 SPEF2Q9C093 1822 aa18.52■□□□□ 0.55
UPK3B-202ENST00000334348 METAP2P50579 478 aaKnown RBP eCLIP18.52■□□□□ 0.55
UPK3B-202ENST00000334348 WHAMMP3Q1A5X7 153 aa18.52■□□□□ 0.55
UPK3B-202ENST00000334348 LRRC31Q6UY01 552 aa18.52■□□□□ 0.55
UPK3B-202ENST00000334348 PPFIBP1Q86W92 1011 aa18.52■□□□□ 0.55
UPK3B-202ENST00000334348 ADAMTS7Q9UKP4 1686 aa18.52■□□□□ 0.55
UPK3B-202ENST00000334348 SLIT3O75094 1523 aa18.51■□□□□ 0.55
UPK3B-202ENST00000334348 C4AP0C0L4 1744 aa18.51■□□□□ 0.55
UPK3B-202ENST00000334348 C4BP0C0L5 1744 aa18.51■□□□□ 0.55
UPK3B-202ENST00000334348 NWD2Q9ULI1 1742 aa18.51■□□□□ 0.55
UPK3B-202ENST00000334348 ZNF213O14771 459 aa18.51■□□□□ 0.55
UPK3B-202ENST00000334348 ERCC5P28715 1186 aaPredicted RBP18.51■□□□□ 0.55
UPK3B-202ENST00000334348 GTF2A1P52655 376 aaPredicted RBP18.51■□□□□ 0.55
UPK3B-202ENST00000334348 CORO7P57737 925 aa18.51■□□□□ 0.55
UPK3B-202ENST00000334348 WWC2Q6AWC2 1192 aa18.51■□□□□ 0.55
UPK3B-202ENST00000334348 CPLX2Q6PUV4 134 aaKnown RBP18.51■□□□□ 0.55
UPK3B-202ENST00000334348 A0A0U1RQJ8 604 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 CTAGE15A4D2H0 777 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 RHOXF2BP0C7M4 288 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 CTAGE8P0CG41 777 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 RBL2Q08999 1139 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 WASHC4Q2M389 1173 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 CTAGE6Q86UF2 777 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 CTAGE4Q8IX94 777 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 ATRIPQ8WXE1 791 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 CCDC102AQ96A19 550 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 RHOXF2Q9BQY4 288 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 SLC52A2Q9HAB3 445 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 ANGEL1Q9UNK9 670 aaKnown RBP18.5■□□□□ 0.55
UPK3B-202ENST00000334348 C5P01031 1676 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 PRR29P0C7W0 189 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 PLCD1P51178 756 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 PACS2Q86VP3 889 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 CERS3Q8IU89 383 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 BRMS1Q9HCU9 246 aa18.5■□□□□ 0.55
UPK3B-202ENST00000334348 H7C1W4 665 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 TEX33O43247 280 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 TRIM29Q14134 588 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 APTXQ7Z2E3 356 aaKnown RBP18.49■□□□□ 0.55
UPK3B-202ENST00000334348 STK11IPQ8N1F8 1099 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 SLC35F6Q8N357 371 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 IGSF22Q8N9C0 903 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 PPM1EQ8WY54 764 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 TTF2Q9UNY4 1162 aaKnown RBP18.49■□□□□ 0.55
UPK3B-202ENST00000334348 DDX60Q8IY21 1712 aaKnown RBP18.49■□□□□ 0.55
UPK3B-202ENST00000334348 EYA2O00167 538 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 PBX1P40424 430 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 FKBP4Q02790 459 aaKnown RBP eCLIP18.49■□□□□ 0.55
UPK3B-202ENST00000334348 TRDNQ13061 729 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 ZNF827Q17R98 1081 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 CT47A1Q5JQC4 288 aaPredicted RBP18.49■□□□□ 0.55
UPK3B-202ENST00000334348 SLC9C2Q5TAH2 1124 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 WDR93Q6P2C0 686 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
UPK3B-202ENST00000334348 NAPGQ99747 312 aaPredicted RBP18.49■□□□□ 0.55
UPK3B-202ENST00000334348 SERTAD1Q9UHV2 236 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 AXIN2Q9Y2T1 843 aa18.49■□□□□ 0.55
UPK3B-202ENST00000334348 FECHP22830 423 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 SPECC1Q5M775 1068 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 APPBP2Q92624 585 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 PHKBQ93100 1093 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 VIPAS39Q9H9C1 493 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 JRKLQ9Y4A0 524 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 POLR2DO15514 142 aaKnown RBP18.48■□□□□ 0.55
UPK3B-202ENST00000334348 MFAP3LO75121 409 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 SNRPA1P09661 255 aaKnown RBP18.48■□□□□ 0.55
UPK3B-202ENST00000334348 PTPREP23469 700 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 KANK3Q6NY19 840 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 PLBD2Q8NHP8 589 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 SPATA20Q8TB22 786 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 MYO1AQ9UBC5 1043 aa18.48■□□□□ 0.55
UPK3B-202ENST00000334348 LRRIQ3A6PVS8 624 aaPredicted RBP18.47■□□□□ 0.55
UPK3B-202ENST00000334348 SH2B2O14492 632 aaPredicted RBP18.47■□□□□ 0.55
UPK3B-202ENST00000334348 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
UPK3B-202ENST00000334348 LRRC24Q50LG9 513 aa18.47■□□□□ 0.55
UPK3B-202ENST00000334348 CCDC51Q96ER9 411 aa18.47■□□□□ 0.55
UPK3B-202ENST00000334348 FAM204AQ9H8W3 233 aa18.47■□□□□ 0.55
UPK3B-202ENST00000334348 PPFIA4O75335 1185 aa18.47■□□□□ 0.55
UPK3B-202ENST00000334348 CIAO1O76071 339 aa18.47■□□□□ 0.55
UPK3B-202ENST00000334348 IARSP41252 1262 aaKnown RBP18.47■□□□□ 0.55
UPK3B-202ENST00000334348 AARSP49588 968 aaKnown RBP eCLIP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms