RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 OVOS2A0A0G2JMS6 1433 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 POLR2DO15514 142 aaKnown RBP10.85□□□□□ -0.67
SS18L1-201ENST00000331758 TNNT1P13805 278 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 ITPK1Q13572 414 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 ARHGAP29Q52LW3 1261 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 CAGE1Q8TC20 777 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 MED23Q9ULK4 1368 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 AMPD3Q01432 767 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 DTHD1Q6ZMT9 781 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
SS18L1-201ENST00000331758 LEMD3Q9Y2U8 911 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 UTYO14607 1347 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 N4BP3O15049 544 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 BTDP43251 543 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 GSDMDP57764 484 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 USP40Q9NVE5 1235 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PTGS1P23219 599 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 MTIF2P46199 727 aaKnown RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 ZNF771Q7L3S4 317 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 LARGE2Q8N3Y3 721 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 TRIM47Q96LD4 638 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 USP42Q9H9J4 1324 aaKnown RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 YEATS4O95619 227 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PDE6BP35913 854 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PPP2R5BQ15173 497 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 GOLGA6L1Q8N7Z2 621 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PNMA1Q8ND90 353 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 AIFM3Q96NN9 605 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 ARGLU1Q9NWB6 273 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 IFNKQ9P0W0 207 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 ZHX1Q9UKY1 873 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-201ENST00000331758 NCOA3Q9Y6Q9 1424 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 SKILP12757 684 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 PRDX5P30044 214 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 JAKMIP3Q5VZ66 844 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 GJB4Q9NTQ9 266 aa10.84□□□□□ -0.67
SS18L1-201ENST00000331758 ASIC1P78348 528 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 TTC38Q5R3I4 469 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 IQUBQ8NA54 791 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 DYNC1I1O14576 645 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 ENOX2Q16206 610 aaKnown RBP10.83□□□□□ -0.68
SS18L1-201ENST00000331758 C2CD5Q86YS7 1000 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 ZNF34Q8IZ26 560 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 STAMQ92783 540 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 TMX1Q9H3N1 280 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 ATP8A2Q9NTI2 1148 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 ZDHHC9Q9Y397 364 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 SEMA3EO15041 775 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 NEMFO60524 1076 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 CSF1RP07333 972 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 GOLGA8HP0CJ92 632 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 MECOMQ03112 1051 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 NOLC1Q14978 699 aaKnown RBP eCLIP10.83□□□□□ -0.68
SS18L1-201ENST00000331758 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 WDR78Q5VTH9 848 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 TAF6LQ9Y6J9 622 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 CARMIL3Q8ND23 1372 aa10.83□□□□□ -0.68
SS18L1-201ENST00000331758 PPIP5K2O43314 1243 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CUTAO60888 179 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 PPP4R3BQ5MIZ7 849 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 FKBP15Q5T1M5 1219 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 NOSTRINQ8IVI9 506 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 PCDHA7Q9UN72 937 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CLIC4Q9Y696 253 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CAMTA2O94983 1202 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 POLD1P28340 1107 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 GRAPQ13588 217 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TNIP1Q15025 636 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 KIF18AQ8NI77 898 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 SMARCC2Q8TAQ2 1214 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TEKT1Q969V4 418 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TSG101Q99816 390 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 JCADQ9P266 1359 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 BBOX1O75936 387 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 ZYXQ15942 572 aaKnown RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CT47A1Q5JQC4 288 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CERS3Q8IU89 383 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 TBC1D10CQ8IV04 446 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 PLA2G12BQ9BX93 195 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 URI1O94763 535 aaPredicted RBP10.82□□□□□ -0.68
SS18L1-201ENST00000331758 CBX1P83916 185 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 STOX1Q6ZVD7 989 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 KIAA1328Q86T90 577 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 FLAD1Q8NFF5 587 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 UIMC1Q96RL1 719 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 RMND1Q9NWS8 449 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 SAMM50Q9Y512 469 aa10.82□□□□□ -0.68
SS18L1-201ENST00000331758 SH2B2O14492 632 aaPredicted RBP10.81□□□□□ -0.68
SS18L1-201ENST00000331758 VPS72Q15906 364 aa10.81□□□□□ -0.68
SS18L1-201ENST00000331758 CLIC6Q96NY7 704 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms