RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 MBD4O95243 580 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 UQCRFS1P1P0C7P4 283 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 CLCN6P51797 869 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 DLK2Q6UY11 383 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 CHST3Q7LGC8 479 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 HAUS7Q99871 368 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 CD2APQ9Y5K6 639 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 C4AP0C0L4 1744 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
ABCF1-201ENST00000326195 LARGE1O95461 756 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-201ENST00000326195 KRBA2Q6ZNG9 492 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 NECAB1Q8N987 351 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 OSBP2Q969R2 916 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 NFKBIEO00221 500 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 PNMA6AP0CW24 399 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-201ENST00000326195 H2AFXP16104 143 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-201ENST00000326195 PDCP20941 246 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 PTH1RQ03431 593 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 TBC1D10BQ4KMP7 808 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-201ENST00000326195 SMARCE1Q969G3 411 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 CLIP2Q9UDT6 1046 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 DDNO94850 711 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-201ENST00000326195 PDE6AP16499 860 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 PTPN14Q15678 1187 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 RAB11FIP4Q86YS3 637 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 LRRC8AQ8IWT6 810 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 ERO1AQ96HE7 468 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 LRRC2Q9BYS8 371 aa11.94□□□□□ -0.5
ABCF1-201ENST00000326195 SH2B1Q9NRF2 756 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-201ENST00000326195 PSMD14O00487 310 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 PRDM1O75626 825 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 MECOMQ03112 1051 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 SAMD7Q7Z3H4 446 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 ADGRA1Q86SQ6 560 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 KBTBD3Q8NAB2 608 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 BICD2Q8TD16 824 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 RBM8AQ9Y5S9 174 aaKnown RBP11.93□□□□□ -0.5
ABCF1-201ENST00000326195 M0R2C6 588 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 FOSBP53539 338 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 ZRSR1Q15695 479 aaKnown RBP11.93□□□□□ -0.5
ABCF1-201ENST00000326195 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■□□ 18.3
ABCF1-201ENST00000326195 DENND2AQ9ULE3 1009 aa11.93□□□□□ -0.5
ABCF1-201ENST00000326195 YDJCA8MPS7 323 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
ABCF1-201ENST00000326195 KRT85P78386 507 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 EVX2Q03828 476 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 BMS1Q14692 1282 aaKnown RBP11.92□□□□□ -0.5
ABCF1-201ENST00000326195 C9orf131Q5VYM1 1079 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 FBXO33Q7Z6M2 555 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 MAPKAPK5Q8IW41 473 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 RTKN2Q8IZC4 609 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 TSPYL1Q9H0U9 437 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 NUP188Q5SRE5 1749 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 KLRG2A4D1S0 409 aaPredicted RBP11.92□□□□□ -0.5
ABCF1-201ENST00000326195 MYO1CO00159 1063 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 EAPPQ56P03 285 aaPredicted RBP11.92□□□□□ -0.5
ABCF1-201ENST00000326195 RUFY3Q7L099 469 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 RASSF4Q9H2L5 321 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 TNRC6CQ9HCJ0 1690 aaKnown RBP11.92□□□□□ -0.5
ABCF1-201ENST00000326195 FAM196BA6NMK8 535 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 RNF113AO15541 343 aaKnown RBP11.92□□□□□ -0.5
ABCF1-201ENST00000326195 SLU7O95391 586 aaKnown RBP11.92□□□□□ -0.5
ABCF1-201ENST00000326195 CXCL9Q07325 125 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 TTC6Q86TZ1 520 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 CERS5Q8N5B7 392 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 EFCC1Q9HA90 598 aa11.92□□□□□ -0.5
ABCF1-201ENST00000326195 ZNF609O15014 1411 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 USP5P45974 858 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 TDO2P48775 406 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 DNAJC25Q9H1X3 360 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 SLC4A4Q9Y6R1 1079 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 SEC31AO94979 1220 aaKnown RBP11.91□□□□□ -0.5
ABCF1-201ENST00000326195 SKILP12757 684 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 PRELPP51888 382 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 MAP3K11Q16584 847 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 LCORLQ8N3X6 602 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 TGFBRAP1Q8WUH2 860 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 C7orf43Q8WVR3 580 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 A0A087WWV3 80 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 TCP10L2B9ZVM9 353 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 GPAA1O43292 621 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 OGFOD1Q8N543 542 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 EPC1Q9H2F5 836 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
ABCF1-201ENST00000326195 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 TAF6LQ9Y6J9 622 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 SALL3Q9BXA9 1300 aa11.91□□□□□ -0.5
ABCF1-201ENST00000326195 EGFRP00533 1210 aa11.9□□□□□ -0.5
ABCF1-201ENST00000326195 LSG1Q9H089 658 aaKnown RBP11.9□□□□□ -0.5
ABCF1-201ENST00000326195 GPR108Q9NPR9 543 aa11.9□□□□□ -0.5
ABCF1-201ENST00000326195 DACT1Q9NYF0 836 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms