RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PCDHAC2Q9Y5I4 1007 aa15.01□□□□□ -0.01
DDX39A-202ENST00000324340 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 PRC1O43663 620 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 SPDYE6P0CI01 402 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 CYP2D6P10635 497 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 RBM5P52756 815 aaKnown RBP eCLIP15□□□□□ -0.014e-7■□□□□ 8.1
DDX39A-202ENST00000324340 EIF6P56537 245 aaKnown RBP15□□□□□ -0.01
DDX39A-202ENST00000324340 ZNF280AP59817 542 aaPredicted RBP15□□□□□ -0.01
DDX39A-202ENST00000324340 CYB5R4Q7L1T6 521 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 DPF2Q92785 391 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 INTS4Q96HW7 963 aaKnown RBP15□□□□□ -0.01
DDX39A-202ENST00000324340 ZBED3Q96IU2 234 aaPredicted RBP15□□□□□ -0.01
DDX39A-202ENST00000324340 GRPEL1Q9HAV7 217 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 DDX4Q9NQI0 724 aaKnown RBP15□□□□□ -0.01
DDX39A-202ENST00000324340 INCENPQ9NQS7 918 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 ZSWIM5Q9P217 1185 aa15□□□□□ -0.01
DDX39A-202ENST00000324340 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
DDX39A-202ENST00000324340 COL2A1P02458 1487 aaPredicted RBP15□□□□□ -0.01
DDX39A-202ENST00000324340 TRAK2O60296 914 aa14.99□□□□□ -0.01
DDX39A-202ENST00000324340 DDIT3P35638 169 aa14.99□□□□□ -0.01
DDX39A-202ENST00000324340 EVX2Q03828 476 aa14.99□□□□□ -0.01
DDX39A-202ENST00000324340 PDE4BQ07343 736 aa14.99□□□□□ -0.01
DDX39A-202ENST00000324340 ME3Q16798 604 aa14.99□□□□□ -0.01
DDX39A-202ENST00000324340 HS1BP3Q53T59 392 aa14.99□□□□□ -0.01
DDX39A-202ENST00000324340 ESR2Q92731 530 aa14.99□□□□□ -0.01
DDX39A-202ENST00000324340 TMEM87BQ96K49 555 aa14.99□□□□□ -0.01
DDX39A-202ENST00000324340 PRMT6Q96LA8 375 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-202ENST00000324340 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-202ENST00000324340 KDM4AO75164 1064 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 LARGE1O95461 756 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 POLR3DP05423 398 aaPredicted RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 PLCD1P51178 756 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 NOL8Q76FK4 1167 aaKnown RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 CHST3Q7LGC8 479 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 IGDCC4Q8TDY8 1250 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 BRF1Q92994 677 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 TRIM44Q96DX7 344 aaPredicted RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 LRRC2Q9BYS8 371 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 TAOK2Q9UL54 1235 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 ZNF541Q9H0D2 1346 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 SH2B2O14492 632 aaPredicted RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 ENTPD3O75355 529 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 LIFRP42702 1097 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 NFIAQ12857 509 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 DLGAP5Q15398 846 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 C16orf86Q6ZW13 317 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 TTC6Q86TZ1 520 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 ZNF274Q96GC6 653 aaPredicted RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 LARP6Q9BRS8 491 aaKnown RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 DHX36Q9H2U1 1008 aaKnown RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 TDRD3Q9H7E2 651 aaKnown RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 FAM198AQ9UFP1 575 aa14.98□□□□□ -0.01
DDX39A-202ENST00000324340 SAP30BPQ9UHR5 308 aaKnown RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 ANGEL1Q9UNK9 670 aaKnown RBP14.98□□□□□ -0.01
DDX39A-202ENST00000324340 ATRNL1Q5VV63 1379 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 GMPSP49915 693 aaPredicted RBP14.97□□□□□ -0.01
DDX39A-202ENST00000324340 FGD1P98174 961 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 GABPAQ06546 454 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 ST3GAL1Q11201 340 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 PICALMQ13492 652 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 RRP12Q5JTH9 1297 aaKnown RBP14.97□□□□□ -0.01
DDX39A-202ENST00000324340 FKBP1CQ5VVH2 108 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.97□□□□□ -0.01
DDX39A-202ENST00000324340 SGMS1Q86VZ5 419 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 EHD4Q9H223 541 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 ZNF287Q9HBT7 754 aa14.97□□□□□ -0.01
DDX39A-202ENST00000324340 CWC22Q9HCG8 908 aaKnown RBP14.97□□□□□ -0.01
DDX39A-202ENST00000324340 SIPA1L1O43166 1804 aa14.96□□□□□ -0.01
DDX39A-202ENST00000324340 CCDC173Q0VFZ6 552 aa14.96□□□□□ -0.02
DDX39A-202ENST00000324340 GPC2Q8N158 579 aa14.96□□□□□ -0.02
DDX39A-202ENST00000324340 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.02
DDX39A-202ENST00000324340 DYNLL2Q96FJ2 89 aa14.96□□□□□ -0.02
DDX39A-202ENST00000324340 PPP1R9BQ96SB3 815 aa14.96□□□□□ -0.02
DDX39A-202ENST00000324340 LY9Q9HBG7 655 aa14.96□□□□□ -0.02
DDX39A-202ENST00000324340 MYOZ2Q9NPC6 264 aa14.96□□□□□ -0.02
DDX39A-202ENST00000324340 GPHNQ9NQX3 736 aaPredicted RBP14.96□□□□□ -0.02
DDX39A-202ENST00000324340 TOMM22Q9NS69 142 aa14.96□□□□□ -0.02
DDX39A-202ENST00000324340 ZNF70Q9UC06 446 aaPredicted RBP14.96□□□□□ -0.02
DDX39A-202ENST00000324340 PFKFB2O60825 505 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 PRDM1O75626 825 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 OFD1O75665 1012 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 CDK8P49336 464 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 CACNB3P54284 484 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 APOBRQ0VD83 1088 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 SART3Q15020 963 aaKnown RBP14.95□□□□□ -0.02
DDX39A-202ENST00000324340 SEC23AQ15436 765 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 STK11IPQ8N1F8 1099 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 GTF3C6Q969F1 213 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 TMOD2Q9NZR1 351 aa14.95□□□□□ -0.02
DDX39A-202ENST00000324340 SHTN1A0MZ66 631 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 WNT10BO00744 389 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 IFIT3O14879 490 aaKnown RBP14.94□□□□□ -0.02
DDX39A-202ENST00000324340 RANBP6O60518 1105 aaKnown RBP14.94□□□□□ -0.02
DDX39A-202ENST00000324340 HLA-DOAP06340 250 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 RASA1P20936 1047 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 PDIA3P30101 505 aaKnown RBP14.94□□□□□ -0.02
DDX39A-202ENST00000324340 SLC4A8Q2Y0W8 1093 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 TMEM67Q5HYA8 995 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 METTL16Q86W50 562 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms