RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 KRBA2Q6ZNG9 492 aa14.01□□□□□ -0.17
SEC24A-201ENST00000322887 SLC16A10Q8TF71 515 aa14.01□□□□□ -0.17
SEC24A-201ENST00000322887 COPRSQ9NQ92 184 aa14.01□□□□□ -0.17
SEC24A-201ENST00000322887 WASHC4Q2M389 1173 aa14.01□□□□□ -0.17
SEC24A-201ENST00000322887 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
SEC24A-201ENST00000322887 H3BQF6 201 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 ANTXR2P58335 489 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 LONRF3Q496Y0 759 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 CCDC150Q8NCX0 1101 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 LLPHQ9BRT6 129 aaKnown RBP14□□□□□ -0.17
SEC24A-201ENST00000322887 NUP98P52948 1817 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 GYS1P13807 737 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 NLGN1Q8N2Q7 840 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 CCDC82Q8N4S0 544 aa14□□□□□ -0.17
SEC24A-201ENST00000322887 PRC1O43663 620 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 ABL1P00519 1130 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 ANO1Q5XXA6 986 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 TMEM139Q8IV31 216 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 CPLX3Q8WVH0 158 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 DHX58Q96C10 678 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 SEC31BQ9NQW1 1179 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 PUF60Q9UHX1 559 aaKnown RBP13.99□□□□□ -0.17
SEC24A-201ENST00000322887 HDAC5Q9UQL6 1122 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 PPP2R2CQ9Y2T4 447 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 PSDA5PKW4 1024 aaPredicted RBP13.99□□□□□ -0.17
SEC24A-201ENST00000322887 N4BP1O75113 896 aaKnown RBP13.99□□□□□ -0.17
SEC24A-201ENST00000322887 ATP2B1P20020 1258 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 CASP1P29466 404 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 SKIDA1Q1XH10 827 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 CMTR1Q8N1G2 835 aaKnown RBP13.99□□□□□ -0.17
SEC24A-201ENST00000322887 FBXO18Q8NFZ0 1043 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 PUS7LQ9H0K6 701 aaKnown RBP13.99□□□□□ -0.17
SEC24A-201ENST00000322887 PLEKHA4Q9H4M7 779 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
SEC24A-201ENST00000322887 IMPACTQ9P2X3 320 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 SRP68Q9UHB9 627 aaKnown RBP13.99□□□□□ -0.17
SEC24A-201ENST00000322887 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 SYKP43405 635 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 FMR1Q06787 632 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■■■□□ 16.2
SEC24A-201ENST00000322887 TAF3Q5VWG9 929 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 FOXR1Q6PIV2 292 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 NLRP10Q86W26 655 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 METTL16Q86W50 562 aaKnown RBP13.99□□□□□ -0.17
SEC24A-201ENST00000322887 PARD6BQ9BYG5 372 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 LZTFL1Q9NQ48 299 aa13.99□□□□□ -0.17
SEC24A-201ENST00000322887 COL24A1Q17RW2 1714 aa13.98□□□□□ -0.17
SEC24A-201ENST00000322887 FGAP02671 866 aa13.98□□□□□ -0.17
SEC24A-201ENST00000322887 IFIT1P09914 478 aaKnown RBP13.98□□□□□ -0.17
SEC24A-201ENST00000322887 KIF23Q02241 960 aaPredicted RBP13.98□□□□□ -0.17
SEC24A-201ENST00000322887 ZMYM1Q5SVZ6 1142 aa13.98□□□□□ -0.17
SEC24A-201ENST00000322887 CC2D1AQ6P1N0 951 aaPredicted RBP13.98□□□□□ -0.17
SEC24A-201ENST00000322887 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
SEC24A-201ENST00000322887 MRPL44Q9H9J2 332 aaKnown RBP13.98□□□□□ -0.17
SEC24A-201ENST00000322887 CPLX1O14810 134 aa13.98□□□□□ -0.17
SEC24A-201ENST00000322887 TOP1P11387 765 aaKnown RBP13.98□□□□□ -0.17
SEC24A-201ENST00000322887 PDIA4P13667 645 aaKnown RBP13.98□□□□□ -0.17
SEC24A-201ENST00000322887 TM4SF1P30408 202 aa13.98□□□□□ -0.17
SEC24A-201ENST00000322887 SMC1AQ14683 1233 aaKnown RBP13.98□□□□□ -0.17
SEC24A-201ENST00000322887 SMIM5Q71RC9 77 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 C10orf67Q8IYJ2 551 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 AGXT2Q9BYV1 514 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
SEC24A-201ENST00000322887 PCDHA5Q9Y5H7 936 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 A0A1B0GUL7 405 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 SOWAHDA6NJG2 315 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 H7C1W4 665 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 MICU3Q86XE3 530 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 CALCOCO1Q9P1Z2 691 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 NIP7Q9Y221 180 aaKnown RBP eCLIP13.97□□□□□ -0.17
SEC24A-201ENST00000322887 UBN2Q6ZU65 1347 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 SH3TC1Q8TE82 1336 aa13.97□□□□□ -0.17
SEC24A-201ENST00000322887 CASZ1Q86V15 1759 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 A0A1W2PQ27 194 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 A0A1W2PQ64 194 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 A0A1W2PQD8 194 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 TULP2O00295 520 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 PHACTR2O75167 634 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 PCCAP05165 728 aaPredicted RBP13.96□□□□□ -0.17
SEC24A-201ENST00000322887 LMAN1P49257 510 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 PPP2R3AQ06190 1150 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 MCM6Q14566 821 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 TBC1D9BQ66K14 1250 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 ZBTB38Q8NAP3 1195 aaPredicted RBP13.96□□□□□ -0.17
SEC24A-201ENST00000322887 MED15Q96RN5 788 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 SETDB2Q96T68 719 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 KCND1Q9NSA2 647 aa13.96□□□□□ -0.17
SEC24A-201ENST00000322887 SAMSN1Q9NSI8 373 aaKnown RBP13.96□□□□□ -0.17
SEC24A-201ENST00000322887 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
SEC24A-201ENST00000322887 CDHR2Q9BYE9 1310 aa13.96□□□□□ -0.18
SEC24A-201ENST00000322887 FOXO4P98177 505 aa13.96□□□□□ -0.18
SEC24A-201ENST00000322887 USP49Q70CQ1 688 aa13.96□□□□□ -0.18
SEC24A-201ENST00000322887 VPS37DQ86XT2 251 aa13.96□□□□□ -0.18
SEC24A-201ENST00000322887 VSTM4Q8IW00 320 aa13.96□□□□□ -0.18
SEC24A-201ENST00000322887 KCNG4Q8TDN1 519 aa13.96□□□□□ -0.18
SEC24A-201ENST00000322887 NYXQ9GZU5 481 aa13.96□□□□□ -0.18
SEC24A-201ENST00000322887 RNF113AO15541 343 aaKnown RBP13.95□□□□□ -0.18
SEC24A-201ENST00000322887 CASP7P55210 303 aa13.95□□□□□ -0.18
SEC24A-201ENST00000322887 ZNF274Q96GC6 653 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms