RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 PNMA3Q9UL41 463 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 AFG3L2Q9Y4W6 797 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 OTOFQ9HC10 1997 aa15.45■□□□□ 0.06
CKS2-201ENST00000314355 A0A0G2JLL6 359 aaPredicted RBP15.44■□□□□ 0.06
CKS2-201ENST00000314355 APBB1O00213 710 aa15.44■□□□□ 0.06
CKS2-201ENST00000314355 PSMC4P43686 418 aa15.44■□□□□ 0.06
CKS2-201ENST00000314355 PRRT2Q7Z6L0 340 aaPredicted RBP15.44■□□□□ 0.06
CKS2-201ENST00000314355 MAPKAPK5Q8IW41 473 aa15.44■□□□□ 0.06
CKS2-201ENST00000314355 RAET1EQ8TD07 263 aa15.44■□□□□ 0.06
CKS2-201ENST00000314355 IL1RAPL2Q9NP60 686 aa15.44■□□□□ 0.06
CKS2-201ENST00000314355 SLC45A1Q9Y2W3 748 aa15.44■□□□□ 0.06
CKS2-201ENST00000314355 ATRNL1Q5VV63 1379 aa15.44■□□□□ 0.06
CKS2-201ENST00000314355 USP17L5A8MUK1 530 aa15.43■□□□□ 0.06
CKS2-201ENST00000314355 ECM2O94769 699 aaPredicted RBP15.43■□□□□ 0.06
CKS2-201ENST00000314355 OSBPP22059 807 aa15.43■□□□□ 0.06
CKS2-201ENST00000314355 CAP2P40123 477 aa15.43■□□□□ 0.06
CKS2-201ENST00000314355 FCGRTP55899 365 aa15.43■□□□□ 0.06
CKS2-201ENST00000314355 MAGEB6Q8N7X4 407 aa15.43■□□□□ 0.06
CKS2-201ENST00000314355 ZNF384Q8TF68 577 aa15.43■□□□□ 0.06
CKS2-201ENST00000314355 GINM1Q9NU53 330 aa15.43■□□□□ 0.06
CKS2-201ENST00000314355 ASNSP08243 561 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 SPP2Q13103 211 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 PDE3AQ14432 1141 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 TTC6Q86TZ1 520 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 ZNF280CQ8ND82 737 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 ARMC5Q96C12 935 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 PIH1D3Q9NQM4 214 aaKnown RBP15.42■□□□□ 0.06
CKS2-201ENST00000314355 ZBTB40Q9NUA8 1239 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 TLR7Q9NYK1 1049 aaKnown RBP15.42■□□□□ 0.06
CKS2-201ENST00000314355 TMOD4Q9NZQ9 345 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 BIN2Q9UBW5 565 aaPredicted RBP15.42■□□□□ 0.06
CKS2-201ENST00000314355 PTCH2Q9Y6C5 1203 aa15.42■□□□□ 0.06
CKS2-201ENST00000314355 LAMB1P07942 1786 aa15.41■□□□□ 0.06
CKS2-201ENST00000314355 RFX7Q2KHR2 1363 aa15.41■□□□□ 0.06
CKS2-201ENST00000314355 CYP2C8P10632 490 aa15.41■□□□□ 0.06
CKS2-201ENST00000314355 GPAT2Q6NUI2 795 aa15.41■□□□□ 0.06
CKS2-201ENST00000314355 PROCA1Q8NCQ7 364 aaPredicted RBP15.41■□□□□ 0.06
CKS2-201ENST00000314355 TRIM47Q96LD4 638 aa15.41■□□□□ 0.06
CKS2-201ENST00000314355 SRRDQ9UH36 339 aa15.41■□□□□ 0.06
CKS2-201ENST00000314355 AGTPBP1Q9UPW5 1226 aa15.41■□□□□ 0.06
CKS2-201ENST00000314355 COL2A1P02458 1487 aaPredicted RBP15.4■□□□□ 0.06
CKS2-201ENST00000314355 FAM196BA6NMK8 535 aa15.4■□□□□ 0.06
CKS2-201ENST00000314355 UBXN2AP68543 259 aa15.4■□□□□ 0.06
CKS2-201ENST00000314355 MIGA1Q8NAN2 632 aa15.4■□□□□ 0.06
CKS2-201ENST00000314355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.4■□□□□ 0.06
CKS2-201ENST00000314355 DNAJC2Q99543 621 aaKnown RBP15.4■□□□□ 0.06
CKS2-201ENST00000314355 PALD1Q9ULE6 856 aa15.4■□□□□ 0.06
CKS2-201ENST00000314355 FLT1P17948 1338 aa15.4■□□□□ 0.06
CKS2-201ENST00000314355 C19orf81C9J6K1 198 aa15.39■□□□□ 0.05
CKS2-201ENST00000314355 POLR3DP05423 398 aaPredicted RBP15.39■□□□□ 0.05
CKS2-201ENST00000314355 GCLCP48506 637 aaPredicted RBP15.39■□□□□ 0.05
CKS2-201ENST00000314355 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
CKS2-201ENST00000314355 MOGSQ13724 837 aa15.39■□□□□ 0.05
CKS2-201ENST00000314355 SLC9C2Q5TAH2 1124 aa15.39■□□□□ 0.05
CKS2-201ENST00000314355 COA7Q96BR5 231 aa15.39■□□□□ 0.05
CKS2-201ENST00000314355 ZNF333Q96JL9 665 aa15.39■□□□□ 0.05
CKS2-201ENST00000314355 ARHGAP39Q9C0H5 1083 aa15.39■□□□□ 0.05
CKS2-201ENST00000314355 CABP5Q9NP86 173 aa15.39■□□□□ 0.05
CKS2-201ENST00000314355 SAP30BPQ9UHR5 308 aaKnown RBP15.39■□□□□ 0.05
CKS2-201ENST00000314355 MYPNQ86TC9 1320 aa15.39■□□□□ 0.05
CKS2-201ENST00000314355 MAGEB6P1A0A0J9YX57 407 aa15.38■□□□□ 0.05
CKS2-201ENST00000314355 MYCP01106 439 aaPredicted RBP15.38■□□□□ 0.05
CKS2-201ENST00000314355 SLURP2P0DP57 97 aa15.38■□□□□ 0.05
CKS2-201ENST00000314355 ADGRA1Q86SQ6 560 aa15.38■□□□□ 0.05
CKS2-201ENST00000314355 NKX2-3Q8TAU0 364 aa15.38■□□□□ 0.05
CKS2-201ENST00000314355 CRNKL1Q9BZJ0 848 aaKnown RBP15.38■□□□□ 0.05
CKS2-201ENST00000314355 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.38■□□□□ 0.05
CKS2-201ENST00000314355 DOCK2Q92608 1830 aa15.38■□□□□ 0.05
CKS2-201ENST00000314355 USP17L10C9JJH3 530 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 TNPO2O14787 897 aaKnown RBP15.37■□□□□ 0.05
CKS2-201ENST00000314355 BCRP11274 1271 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 GRK4P32298 578 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 HMGCS2P54868 508 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 IRX3P78415 501 aaPredicted RBP15.37■□□□□ 0.05
CKS2-201ENST00000314355 CCDC84Q86UT8 332 aaPredicted RBP15.37■□□□□ 0.05
CKS2-201ENST00000314355 CCAR1Q8IX12 1150 aaKnown RBP15.37■□□□□ 0.05
CKS2-201ENST00000314355 AMOTL1Q8IY63 956 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 SH3TC2Q8TF17 1288 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 WDR18Q9BV38 432 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 LRRCC1Q9C099 1032 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 ANTXR1Q9H6X2 564 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 SERPINB13Q9UIV8 391 aa15.37■□□□□ 0.05
CKS2-201ENST00000314355 POTEFA5A3E0 1075 aa15.36■□□□□ 0.05
CKS2-201ENST00000314355 GOLIM4O00461 696 aa15.36■□□□□ 0.05
CKS2-201ENST00000314355 BACE1P56817 501 aa15.36■□□□□ 0.05
CKS2-201ENST00000314355 SH3D19Q5HYK7 790 aa15.36■□□□□ 0.05
CKS2-201ENST00000314355 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
CKS2-201ENST00000314355 NDUFB9Q9Y6M9 179 aa15.36■□□□□ 0.05
CKS2-201ENST00000314355 EN2P19622 333 aaPredicted RBP15.35■□□□□ 0.05
CKS2-201ENST00000314355 PRPF38BQ5VTL8 546 aaKnown RBP15.35■□□□□ 0.05
CKS2-201ENST00000314355 ANKRD13CQ8N6S4 541 aa15.35■□□□□ 0.05
CKS2-201ENST00000314355 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
CKS2-201ENST00000314355 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
CKS2-201ENST00000314355 PAG1Q9NWQ8 432 aa15.35■□□□□ 0.05
CKS2-201ENST00000314355 ZBTB47Q9UFB7 747 aaPredicted RBP15.35■□□□□ 0.05
CKS2-201ENST00000314355 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
CKS2-201ENST00000314355 GDF11O95390 407 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 ATP5JP18859 108 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 USP14P54578 494 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms