RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 LDLRAD1Q5T700 205 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 IFNL3Q8IZI9 196 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 STK11IPQ8N1F8 1099 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDE4D-201ENST00000309641 CNKSR2Q8WXI2 1034 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 WRNIP1Q96S55 665 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 DHX36Q9H2U1 1008 aaKnown RBP10.9□□□□□ -0.66
PDE4D-201ENST00000309641 PI4KBQ9UBF8 816 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 POLR3DP05423 398 aaPredicted RBP10.89□□□□□ -0.67
PDE4D-201ENST00000309641 HSPD1P10809 573 aaKnown RBP10.89□□□□□ -0.67
PDE4D-201ENST00000309641 GRM1Q13255 1194 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 MAP3K11Q16584 847 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 C12orf60Q5U649 245 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 CYP4F22Q6NT55 531 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 ARMC9Q7Z3E5 817 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.89□□□□□ -0.67
PDE4D-201ENST00000309641 RASSF10A6NK89 507 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 HIP1O00291 1037 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 FKBP1BP68106 108 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 VGLL4Q14135 290 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
PDE4D-201ENST00000309641 METTL16Q86W50 562 aaKnown RBP10.89□□□□□ -0.67
PDE4D-201ENST00000309641 TICAM2Q86XR7 235 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 ZIC5Q96T25 663 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 ZNF112Q9UJU3 913 aa10.89□□□□□ -0.67
PDE4D-201ENST00000309641 MINDY4BA8MYZ0 360 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 SGSM2O43147 1006 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 FGAP02671 866 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 GNAT2P19087 354 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 IREB2P48200 963 aaKnown RBP10.88□□□□□ -0.67
PDE4D-201ENST00000309641 TDO2P48775 406 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 PTH1RQ03431 593 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 GABPAQ06546 454 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
PDE4D-201ENST00000309641 DEFB115Q30KQ5 88 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 DCAF15Q66K64 600 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 INCENPQ9NQS7 918 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 SERPINB13Q9UIV8 391 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
PDE4D-201ENST00000309641 TBC1D12O60347 775 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 HLA-DOAP06340 250 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 GJA5P36382 358 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 ZNF157P51786 506 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-201ENST00000309641 GIMAP6Q6P9H5 292 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 PAXIP1Q6ZW49 1069 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-201ENST00000309641 TTC6Q86TZ1 520 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 FOXP4Q8IVH2 680 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-201ENST00000309641 CRACR2BQ8N4Y2 399 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-201ENST00000309641 NAPBQ9H115 298 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 ELP3Q9H9T3 547 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 SNCAIPQ9Y6H5 919 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 FAM155AB1AL88 458 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-201ENST00000309641 AOC2O75106 756 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 SHMT1P34896 483 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 VEGFBP49765 207 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 RGMBQ6NW40 437 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 ANKRD13AQ8IZ07 590 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 ESYT1Q9BSJ8 1104 aa10.87□□□□□ -0.67
PDE4D-201ENST00000309641 HERC5Q9UII4 1024 aaKnown RBP10.87□□□□□ -0.67
PDE4D-201ENST00000309641 GDF11O95390 407 aa10.86□□□□□ -0.67
PDE4D-201ENST00000309641 CTDSPL2Q05D32 466 aa10.86□□□□□ -0.67
PDE4D-201ENST00000309641 SBK1Q52WX2 424 aa10.86□□□□□ -0.67
PDE4D-201ENST00000309641 RASAL3Q86YV0 1011 aa10.86□□□□□ -0.67
PDE4D-201ENST00000309641 HOOK2Q96ED9 719 aa10.86□□□□□ -0.67
PDE4D-201ENST00000309641 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
PDE4D-201ENST00000309641 CAPNS2Q96L46 248 aa10.86□□□□□ -0.67
PDE4D-201ENST00000309641 EHD4Q9H223 541 aa10.86□□□□□ -0.67
PDE4D-201ENST00000309641 ARPP21Q9UBL0 812 aaPredicted RBP10.86□□□□□ -0.67
PDE4D-201ENST00000309641 CDC45O75419 566 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 CAP2P40123 477 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 CDK8P49336 464 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 HAND2P61296 217 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 ALX1Q15699 326 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 NKX2-3Q8TAU0 364 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 SLC10A4Q96EP9 437 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 NACAP1Q9BZK3 213 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 NBPF3Q9H094 633 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 PRDM1O75626 825 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 PPARAQ07869 468 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 TATDN1Q6P1N9 297 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 C16orf86Q6ZW13 317 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 OPTNQ96CV9 577 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 HHIPL1Q96JK4 782 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 CSADQ9Y600 493 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 RAD50Q92878 1312 aa10.85□□□□□ -0.67
PDE4D-201ENST00000309641 CTNND1O60716 968 aaKnown RBP10.84□□□□□ -0.67
PDE4D-201ENST00000309641 SLC10A3P09131 477 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 MFAP1P55081 439 aaKnown RBP10.84□□□□□ -0.67
PDE4D-201ENST00000309641 CLEC10AQ8IUN9 316 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 SCYL3Q8IZE3 742 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 DSCC1Q9BVC3 393 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 TRIM34Q9BYJ4 488 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 TAF6LQ9Y6J9 622 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 LAMB1P07942 1786 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 WDR33Q9C0J8 1336 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms