RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 IMPG2Q9BZV3 1241 aa23.33■■□□□ 1.32
LTBP3-201ENST00000301873 HOMER2Q9NSB8 354 aa23.33■■□□□ 1.32
LTBP3-201ENST00000301873 LRWD1Q9UFC0 647 aa23.33■■□□□ 1.32
LTBP3-201ENST00000301873 KDM6BO15054 1643 aa23.33■■□□□ 1.32
LTBP3-201ENST00000301873 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.32
LTBP3-201ENST00000301873 SYNRGQ9UMZ2 1314 aa23.33■■□□□ 1.32
LTBP3-201ENST00000301873 EEF2P13639 858 aaKnown RBP23.32■■□□□ 1.32
LTBP3-201ENST00000301873 RPL13P26373 211 aaKnown RBP23.32■■□□□ 1.32
LTBP3-201ENST00000301873 LRMPQ12912 555 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 TGFBRAP1Q8WUH2 860 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 BACH1O14867 736 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 ECM2O94769 699 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-201ENST00000301873 BCAMP50895 628 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 TERF1P54274 439 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 CTSWP56202 376 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 PAK1Q13153 545 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 MAP4K1Q92918 833 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 TIGD1Q96MW7 591 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 CDCA7Q9BWT1 371 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-201ENST00000301873 GTPBP4Q9BZE4 634 aaKnown RBP23.32■■□□□ 1.32
LTBP3-201ENST00000301873 SERTAD1Q9UHV2 236 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 KDRP35968 1356 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 PNOCQ13519 176 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 HERC4Q5GLZ8 1057 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-201ENST00000301873 PAXIP1Q6ZW49 1069 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-201ENST00000301873 BLZF1Q9H2G9 400 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 BTBD18B2RXH4 712 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 SPECC1LQ69YQ0 1117 aa23.32■■□□□ 1.32
LTBP3-201ENST00000301873 NONOQ15233 471 aaKnown RBP eCLIP23.31■■□□□ 1.32
LTBP3-201ENST00000301873 LSG1Q9H089 658 aaKnown RBP23.31■■□□□ 1.32
LTBP3-201ENST00000301873 SMIM23A6NLE4 172 aa23.31■■□□□ 1.32
LTBP3-201ENST00000301873 IFNL3Q8IZI9 196 aa23.31■■□□□ 1.32
LTBP3-201ENST00000301873 PFKFB1P16118 471 aa23.31■■□□□ 1.32
LTBP3-201ENST00000301873 TCP10Q12799 353 aa23.31■■□□□ 1.32
LTBP3-201ENST00000301873 PAIP2Q9BPZ3 127 aaKnown RBP23.31■■□□□ 1.32
LTBP3-201ENST00000301873 IKBKGQ9Y6K9 419 aa23.31■■□□□ 1.32
LTBP3-201ENST00000301873 SLC1A4P43007 532 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 SNX29Q8TEQ0 813 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 OSBPL3Q9H4L5 887 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 PPP2R5BQ15173 497 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 DPH6Q7L8W6 267 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 A0A1W2PRG0 241 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 OPA1O60313 960 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 ELF2Q15723 593 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 ZNF827Q17R98 1081 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 UBE2Q2Q8WVN8 375 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 RBM17Q96I25 401 aaKnown RBP23.3■■□□□ 1.32
LTBP3-201ENST00000301873 ARHGAP6O43182 974 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 CYP21A2P08686 494 aa23.3■■□□□ 1.32
LTBP3-201ENST00000301873 PRPHP41219 470 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 PPARAQ07869 468 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 PSMB7Q99436 277 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 LMTK3Q96Q04 1460 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 PFKFB2O60825 505 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 CNNM4Q6P4Q7 775 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 ZNF853P0CG23 659 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 ZBTB38Q8NAP3 1195 aaPredicted RBP23.29■■□□□ 1.32
LTBP3-201ENST00000301873 GIMAP7Q8NHV1 300 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 TBC1D7Q9P0N9 293 aa23.29■■□□□ 1.32
LTBP3-201ENST00000301873 IGSF1Q8N6C5 1336 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 ADORA1P30542 326 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 CETN3O15182 167 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 PHKA1P46020 1223 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 ARHGEF25Q86VW2 580 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 CCDC25Q86WR0 208 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 GREM2Q9H772 168 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 ASAP1Q9ULH1 1129 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 ATP6V0A2Q9Y487 856 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 SSH2Q76I76 1423 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 FANCBQ8NB91 859 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 PRR36Q9H6K5 1346 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 IPO4Q8TEX9 1081 aaKnown RBP23.28■■□□□ 1.32
LTBP3-201ENST00000301873 SLF1Q9BQI6 1058 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 INCENPQ9NQS7 918 aa23.28■■□□□ 1.32
LTBP3-201ENST00000301873 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
LTBP3-201ENST00000301873 ADKP55263 362 aaKnown RBP23.27■■□□□ 1.32
LTBP3-201ENST00000301873 ZNF589Q86UQ0 364 aaPredicted RBP23.27■■□□□ 1.32
LTBP3-201ENST00000301873 MYRIPQ8NFW9 859 aa23.27■■□□□ 1.32
LTBP3-201ENST00000301873 PCDHA7Q9UN72 937 aa23.27■■□□□ 1.32
LTBP3-201ENST00000301873 MAEAQ7L5Y9 396 aa23.27■■□□□ 1.32
LTBP3-201ENST00000301873 NOSTRINQ8IVI9 506 aa23.27■■□□□ 1.32
LTBP3-201ENST00000301873 NAPGQ99747 312 aaPredicted RBP23.27■■□□□ 1.32
LTBP3-201ENST00000301873 PDIA3P30101 505 aaKnown RBP23.26■■□□□ 1.31
LTBP3-201ENST00000301873 TUBB4BP68371 445 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 FBXO18Q8NFZ0 1043 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 MNAT1P51948 309 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 IMPACTQ9P2X3 320 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 AATKQ6ZMQ8 1374 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 PCCAP05165 728 aaPredicted RBP23.26■■□□□ 1.31
LTBP3-201ENST00000301873 TUBBP07437 444 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 GSTA5Q7RTV2 222 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 NELFCDQ8IXH7 590 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 CLIC6Q96NY7 704 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 RASAL2Q9UJF2 1139 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 TNKSO95271 1327 aa23.26■■□□□ 1.31
LTBP3-201ENST00000301873 HARSP12081 509 aaKnown RBP23.26■■□□□ 1.31
LTBP3-201ENST00000301873 PPP1R2P41236 205 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms