RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 C4BP0C0L5 1744 aa25.39■■□□□ 1.65
TPM4-201ENST00000300933 KINO60870 393 aaKnown RBP25.39■■□□□ 1.65
TPM4-201ENST00000300933 CDKL5O76039 1030 aa25.39■■□□□ 1.65
TPM4-201ENST00000300933 RBM43Q6ZSC3 357 aaKnown RBP25.39■■□□□ 1.65
TPM4-201ENST00000300933 ZNF165P49910 485 aa25.38■■□□□ 1.65
TPM4-201ENST00000300933 SSRP1Q08945 709 aaKnown RBP25.38■■□□□ 1.65
TPM4-201ENST00000300933 SART3Q15020 963 aaKnown RBP25.38■■□□□ 1.65
TPM4-201ENST00000300933 CNBD1Q8NA66 436 aa25.38■■□□□ 1.65
TPM4-201ENST00000300933 CHD4Q14839 1912 aa25.38■■□□□ 1.65
TPM4-201ENST00000300933 TNKSO95271 1327 aa25.38■■□□□ 1.65
TPM4-201ENST00000300933 NMT2O60551 498 aa25.38■■□□□ 1.65
TPM4-201ENST00000300933 RTN1Q16799 776 aa25.38■■□□□ 1.65
TPM4-201ENST00000300933 ANO1Q5XXA6 986 aa25.38■■□□□ 1.65
TPM4-201ENST00000300933 C11orf57Q6ZUT1 292 aaPredicted RBP25.38■■□□□ 1.65
TPM4-201ENST00000300933 FAM160A1Q05DH4 1040 aa25.37■■□□□ 1.65
TPM4-201ENST00000300933 GRIK5Q16478 980 aa25.37■■□□□ 1.65
TPM4-201ENST00000300933 CTR9Q6PD62 1173 aa25.37■■□□□ 1.65
TPM4-201ENST00000300933 GTPBP4Q9BZE4 634 aaKnown RBP25.37■■□□□ 1.65
TPM4-201ENST00000300933 BAZ2BQ9UIF8 2168 aaKnown RBP25.37■■□□□ 1.65
TPM4-201ENST00000300933 WDHD1O75717 1129 aaPredicted RBP25.37■■□□□ 1.65
TPM4-201ENST00000300933 CACNA1SQ13698 1873 aa25.37■■□□□ 1.65
TPM4-201ENST00000300933 SCN7AQ01118 1682 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 FAM47AQ5JRC9 791 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 BRAPQ7Z569 592 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 ZNF654Q8IZM8 581 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 MRPS27Q92552 414 aaKnown RBP25.36■■□□□ 1.65
TPM4-201ENST00000300933 SDF4Q9BRK5 362 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 ANKRD2Q9GZV1 360 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 BTBD18B2RXH4 712 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 ATL3Q6DD88 541 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 ADALQ6DHV7 355 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 MYH2Q9UKX2 1941 aa25.36■■□□□ 1.65
TPM4-201ENST00000300933 PTGS1P23219 599 aa25.35■■□□□ 1.65
TPM4-201ENST00000300933 BCL11BQ9C0K0 894 aaPredicted RBP25.35■■□□□ 1.65
TPM4-201ENST00000300933 RNF41Q9H4P4 317 aaPredicted RBP25.35■■□□□ 1.65
TPM4-201ENST00000300933 POLR3EQ9NVU0 708 aa25.35■■□□□ 1.65
TPM4-201ENST00000300933 TRIM37O94972 964 aa25.35■■□□□ 1.65
TPM4-201ENST00000300933 ATP2B1P20020 1258 aa25.35■■□□□ 1.65
TPM4-201ENST00000300933 TRIM29Q14134 588 aa25.35■■□□□ 1.65
TPM4-201ENST00000300933 FMR1NBQ8N0W7 255 aaPredicted RBP25.35■■□□□ 1.65
TPM4-201ENST00000300933 ENAHQ8N8S7 591 aaPredicted RBP25.35■■□□□ 1.65
TPM4-201ENST00000300933 ESR2Q92731 530 aa25.35■■□□□ 1.65
TPM4-201ENST00000300933 MYH13Q9UKX3 1938 aa25.34■■□□□ 1.65
TPM4-201ENST00000300933 FANCBQ8NB91 859 aa25.34■■□□□ 1.65
TPM4-201ENST00000300933 CLIC6Q96NY7 704 aa25.34■■□□□ 1.65
TPM4-201ENST00000300933 QTRT2Q9H974 415 aaKnown RBP25.34■■□□□ 1.65
TPM4-201ENST00000300933 A0A1B0GUL6 1792 aa25.34■■□□□ 1.65
TPM4-201ENST00000300933 DIXDC1Q155Q3 683 aa25.34■■□□□ 1.65
TPM4-201ENST00000300933 PRR5LQ6MZQ0 368 aa25.34■■□□□ 1.65
TPM4-201ENST00000300933 FMNL1O95466 1100 aaPredicted RBP25.33■■□□□ 1.65
TPM4-201ENST00000300933 ISM2Q6H9L7 571 aa25.33■■□□□ 1.65
TPM4-201ENST00000300933 BIN1O00499 593 aa25.32■■□□□ 1.64
TPM4-201ENST00000300933 IFNAR1P17181 557 aa25.32■■□□□ 1.64
TPM4-201ENST00000300933 NR5A1Q13285 461 aa25.32■■□□□ 1.64
TPM4-201ENST00000300933 SEC23AQ15436 765 aa25.32■■□□□ 1.64
TPM4-201ENST00000300933 SPECC1Q5M775 1068 aa25.32■■□□□ 1.64
TPM4-201ENST00000300933 KCNG4Q8TDN1 519 aa25.32■■□□□ 1.64
TPM4-201ENST00000300933 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.32■■□□□ 1.64
TPM4-201ENST00000300933 DCP1AQ9NPI6 582 aaPredicted RBP25.32■■□□□ 1.64
TPM4-201ENST00000300933 GOLGA6L6A8MZA4 724 aa25.32■■□□□ 1.64
TPM4-201ENST00000300933 DZIP1Q86YF9 867 aaKnown RBP25.32■■□□□ 1.64
TPM4-201ENST00000300933 TNRC6CQ9HCJ0 1690 aaKnown RBP25.32■■□□□ 1.64
TPM4-201ENST00000300933 THSD7AQ9UPZ6 1657 aa25.32■■□□□ 1.64
TPM4-201ENST00000300933 AXDND1Q5T1B0 1012 aaPredicted RBP25.31■■□□□ 1.64
TPM4-201ENST00000300933 CRACR2BQ8N4Y2 399 aaPredicted RBP25.31■■□□□ 1.64
TPM4-201ENST00000300933 ANKRD7Q92527 254 aa25.31■■□□□ 1.64
TPM4-201ENST00000300933 ZSCAN10Q96SZ4 725 aaPredicted RBP25.31■■□□□ 1.64
TPM4-201ENST00000300933 ZNF831Q5JPB2 1677 aa25.31■■□□□ 1.64
TPM4-201ENST00000300933 MROH7-TTC4A0A0A0MT08 1334 aa25.31■■□□□ 1.64
TPM4-201ENST00000300933 YEATS4O95619 227 aa25.31■■□□□ 1.64
TPM4-201ENST00000300933 USP17L8P0C7I0 530 aa25.31■■□□□ 1.64
TPM4-201ENST00000300933 NBPF11Q86T75 865 aa25.31■■□□□ 1.64
TPM4-201ENST00000300933 OXER1Q8TDS5 423 aa25.31■■□□□ 1.64
TPM4-201ENST00000300933 GYS1P13807 737 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 GRAPQ13588 217 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 GRAPLQ8TC17 118 aaPredicted RBP25.3■■□□□ 1.64
TPM4-201ENST00000300933 C16orf45Q96MC5 204 aaPredicted RBP25.3■■□□□ 1.64
TPM4-201ENST00000300933 TRPC5Q9UL62 973 aaPredicted RBP25.3■■□□□ 1.64
TPM4-201ENST00000300933 NHSQ6T4R5 1651 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 LRMPQ12912 555 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 TRIM5Q9C035 493 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 ANAPC4Q9UJX5 808 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 PLEKHA8P1O95397 391 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 IFIT1BQ5T764 474 aaKnown RBP25.3■■□□□ 1.64
TPM4-201ENST00000300933 DRC7Q8IY82 874 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 DIS3L2Q8IYB7 885 aaKnown RBP25.3■■□□□ 1.64
TPM4-201ENST00000300933 TRIM22Q8IYM9 498 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 BRIP1Q9BX63 1249 aa25.3■■□□□ 1.64
TPM4-201ENST00000300933 PFKFB1P16118 471 aa25.29■■□□□ 1.64
TPM4-201ENST00000300933 SLC39A14Q15043 492 aa25.29■■□□□ 1.64
TPM4-201ENST00000300933 RPGRQ92834 1020 aaKnown RBP25.29■■□□□ 1.64
TPM4-201ENST00000300933 MCM9Q9NXL9 1143 aa25.29■■□□□ 1.64
TPM4-201ENST00000300933 NRBP1Q9UHY1 535 aa25.29■■□□□ 1.64
TPM4-201ENST00000300933 ZNF202O95125 648 aa25.29■■□□□ 1.64
TPM4-201ENST00000300933 GPSM2P81274 684 aa25.29■■□□□ 1.64
TPM4-201ENST00000300933 SHISA4Q96DD7 197 aa25.29■■□□□ 1.64
TPM4-201ENST00000300933 TAF1LQ8IZX4 1826 aa25.28■■□□□ 1.64
TPM4-201ENST00000300933 SEMA3EO15041 775 aa25.28■■□□□ 1.64
TPM4-201ENST00000300933 KIF20AO95235 890 aa25.28■■□□□ 1.64
TPM4-201ENST00000300933 SERPINB2P05120 415 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms