RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 KDM5BQ9UGL1 1544 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 YEATS2Q9ULM3 1422 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 RFC1P35251 1148 aaPredicted RBP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 GRM1Q13255 1194 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 PHLDB3Q6NSJ2 640 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 HS2ST1Q7LGA3 356 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 IFT20Q8IY31 132 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 VPS16Q9H269 839 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 DDX21Q9NR30 783 aaKnown RBP eCLIP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 EXOC5O00471 708 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 TNNI2P48788 182 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 GNAQP50148 359 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 NAA16Q6N069 864 aaPredicted RBP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 ZFYVE16Q7Z3T8 1539 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 CALUO43852 315 aaPredicted RBP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 SNRPA1P09661 255 aaKnown RBP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 HARSP12081 509 aaKnown RBP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 DMTNQ08495 405 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 RAB3GAP1Q15042 981 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 TBX22Q9Y458 520 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 ZNF174Q15697 407 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 SV2BQ7L1I2 683 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 C16orf71Q8IYS4 520 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 IFNL2Q8IZJ0 200 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 RNF10Q8N5U6 811 aaKnown RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 SNX21Q969T3 373 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 FAM204AQ9H8W3 233 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 TTF2Q9UNY4 1162 aaKnown RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 TARBP1Q13395 1621 aaKnown RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 ANXA1P04083 346 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 BIRC3Q13489 604 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 LIN9Q5TKA1 542 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 CNPY4Q8N129 248 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 DEUP1Q05D60 604 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 C17orf53Q8N3J3 647 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 RAB3IPQ96QF0 476 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 TTC41PQ6P2S7 1318 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 GOLGA6BA6NDN3 693 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 GNAT2P19087 354 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 BEND3Q5T5X7 828 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 ZC3H15Q8WU90 426 aaKnown RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 MED4Q9NPJ6 270 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 STK38LQ9Y2H1 464 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 POTEB3A0JP26 581 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 TBC1D8O95759 1140 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 POTEBQ6S5H4 581 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 RPAINQ86UA6 219 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 MGARPQ8TDB4 240 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 TSC1Q92574 1164 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 RIOK3O14730 519 aaKnown RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 CREB3O43889 395 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 PARP1P09874 1014 aaKnown RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 HHATQ5VTY9 493 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 NLRP1Q9C000 1473 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 GCKP35557 465 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 TFCP2Q12800 502 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 SF3A3Q12874 501 aaKnown RBP eCLIP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 ELF2Q15723 593 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 TRIM68Q6AZZ1 485 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 NOX5Q96PH1 765 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 SETDB2Q96T68 719 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 RLBP1P12271 317 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 VWA3BQ502W6 1294 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 ATL3Q6DD88 541 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 PPIP5K1Q6PFW1 1433 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 CREB3L3Q68CJ9 461 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 FLAD1Q8NFF5 587 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 MCM9Q9NXL9 1143 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 WASLO00401 505 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-201ENST00000298875 RSPH3Q86UC2 560 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 IGSF22Q8N9C0 903 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 ZRANB1Q9UGI0 708 aa6.18□□□□□ -1.42
CPSF2-201ENST00000298875 GRM8O00222 908 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 ATP8B1O43520 1251 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 GSDMBQ8TAX9 411 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 DRC3Q9H069 523 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 ZC4H2Q9NQZ6 224 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 SAP30BPQ9UHR5 308 aaKnown RBP6.17□□□□□ -1.42
CPSF2-201ENST00000298875 TRIM14Q14142 442 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 EFCAB13Q8IY85 973 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 STX10O60499 249 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 CUL4BQ13620 913 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 SECISBP2LQ93073 1101 aaKnown RBP6.17□□□□□ -1.42
CPSF2-201ENST00000298875 VEZTQ9HBM0 779 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 ASIC3Q9UHC3 531 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 OAS2P29728 719 aaKnown RBP6.17□□□□□ -1.42
CPSF2-201ENST00000298875 PDE4DQ08499 809 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 TRAF1Q13077 416 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 MYRIPQ8NFW9 859 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 ACSBG1Q96GR2 724 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 TRIM6Q9C030 488 aaPredicted RBP6.17□□□□□ -1.42
CPSF2-201ENST00000298875 CLSTN2Q9H4D0 955 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 PA2G4Q9UQ80 394 aaKnown RBP6.17□□□□□ -1.42
CPSF2-201ENST00000298875 NOC2LQ9Y3T9 749 aaKnown RBP6.17□□□□□ -1.42
CPSF2-201ENST00000298875 ANKRD44Q8N8A2 993 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 GDAP1L1Q96MZ0 367 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 FAM170AA1A519 330 aa6.17□□□□□ -1.42
CPSF2-201ENST00000298875 GNA11P29992 359 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms