RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SLC1A4P43007 532 aa19.35■□□□□ 0.69
CDCP1-201ENST00000296129 NLRP12P59046 1061 aa19.35■□□□□ 0.69
CDCP1-201ENST00000296129 TRMT2AQ8IZ69 625 aaKnown RBP19.35■□□□□ 0.69
CDCP1-201ENST00000296129 LARGE2Q8N3Y3 721 aa19.35■□□□□ 0.69
CDCP1-201ENST00000296129 KRT25Q7Z3Z0 450 aa19.35■□□□□ 0.69
CDCP1-201ENST00000296129 CHD1O14646 1710 aa19.35■□□□□ 0.69
CDCP1-201ENST00000296129 GYG1P46976 350 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 HOMER2Q9NSB8 354 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 ARPP21Q9UBL0 812 aaPredicted RBP19.34■□□□□ 0.69
CDCP1-201ENST00000296129 IGSF1Q8N6C5 1336 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 PCCAP05165 728 aaPredicted RBP19.34■□□□□ 0.69
CDCP1-201ENST00000296129 TERF1P54274 439 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 FANCCQ00597 558 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 USH1GQ495M9 461 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 GSTA5Q7RTV2 222 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 TSGA10Q9BZW7 698 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 BCAMP50895 628 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 NCBP1Q09161 790 aaKnown RBP19.34■□□□□ 0.69
CDCP1-201ENST00000296129 TBC1D8BQ0IIM8 1120 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 PAK1Q13153 545 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 CCDC122Q5T0U0 273 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 UIMC1Q96RL1 719 aa19.34■□□□□ 0.69
CDCP1-201ENST00000296129 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.69
CDCP1-201ENST00000296129 LZTS2Q9BRK4 669 aa19.33■□□□□ 0.69
CDCP1-201ENST00000296129 TMOD4Q9NZQ9 345 aa19.33■□□□□ 0.69
CDCP1-201ENST00000296129 CALCOCO1Q9P1Z2 691 aa19.33■□□□□ 0.69
CDCP1-201ENST00000296129 PRDM15P57071 1507 aaPredicted RBP19.33■□□□□ 0.69
CDCP1-201ENST00000296129 NPHP4O75161 1426 aaPredicted RBP19.33■□□□□ 0.68
CDCP1-201ENST00000296129 A0A1W2PRG0 241 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 INCENPQ9NQS7 918 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 RHOXF2BP0C7M4 288 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 ARID4AP29374 1257 aaPredicted RBP19.33■□□□□ 0.68
CDCP1-201ENST00000296129 GIGYF2Q6Y7W6 1299 aaKnown RBP19.33■□□□□ 0.68
CDCP1-201ENST00000296129 RHOXF2Q9BQY4 288 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 IFNL3Q8IZI9 196 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 CSGALNACT2Q8N6G5 542 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 SNX29Q8TEQ0 813 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 DDX12PQ92771 950 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 GLT8D2Q9H1C3 349 aa19.33■□□□□ 0.68
CDCP1-201ENST00000296129 MAP3K15Q6ZN16 1313 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 POSTNQ15063 836 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 LRWD1Q9UFC0 647 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 BRD1O95696 1058 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 HSPD1P10809 573 aaKnown RBP19.32■□□□□ 0.68
CDCP1-201ENST00000296129 ZNF75DP51815 510 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 CMTR1Q8N1G2 835 aaKnown RBP19.32■□□□□ 0.68
CDCP1-201ENST00000296129 APBA3O96018 575 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 TBC1D22AQ8WUA7 517 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 ERBB4Q15303 1308 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 ZNF654Q8IZM8 581 aa19.32■□□□□ 0.68
CDCP1-201ENST00000296129 DDX39AO00148 427 aaKnown RBP19.31■□□□□ 0.68
CDCP1-201ENST00000296129 CALCRLQ16602 461 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 PPP1R9BQ96SB3 815 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 TPCN1Q9ULQ1 816 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 COMMD10Q9Y6G5 202 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 PDE6AP16499 860 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 ZNF445P59923 1031 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 GTF2IP78347 998 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 SUPT20HQ8NEM7 779 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 SDR42E1Q8WUS8 393 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 CCDC169A6NNP5 214 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 TRIM14Q14142 442 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 MLKLQ8NB16 471 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 USP17L12C9JPN9 530 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 USP17L21D6R901 530 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 CALUO43852 315 aaPredicted RBP19.31■□□□□ 0.68
CDCP1-201ENST00000296129 MYCLP12524 364 aaPredicted RBP19.31■□□□□ 0.68
CDCP1-201ENST00000296129 ALDH1B1P30837 517 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 GREM2Q9H772 168 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 HARSP12081 509 aaKnown RBP19.31■□□□□ 0.68
CDCP1-201ENST00000296129 SPECC1LQ69YQ0 1117 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 ARHGEF25Q86VW2 580 aa19.31■□□□□ 0.68
CDCP1-201ENST00000296129 ZNF274Q96GC6 653 aaPredicted RBP19.31■□□□□ 0.68
CDCP1-201ENST00000296129 ZSCAN10Q96SZ4 725 aaPredicted RBP19.31■□□□□ 0.68
CDCP1-201ENST00000296129 ZBTB9Q96C00 473 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 CHRNDQ07001 517 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 MFSD14BQ5SR56 506 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 DYMQ7RTS9 669 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 ZSWIM6Q9HCJ5 1215 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 USP40Q9NVE5 1235 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 KRT5P13647 590 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 TSNARE1Q96NA8 513 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 ZNF354CQ86Y25 554 aa19.3■□□□□ 0.68
CDCP1-201ENST00000296129 OPA1O60313 960 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 CABP7Q86V35 215 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 BLZF1Q9H2G9 400 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 CA8P35219 290 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 IFT81Q8WYA0 676 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 ZFP91Q96JP5 570 aaPredicted RBP19.29■□□□□ 0.68
CDCP1-201ENST00000296129 TLR7Q9NYK1 1049 aaKnown RBP19.29■□□□□ 0.68
CDCP1-201ENST00000296129 ADCY9O60503 1353 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 CYP26C1Q6V0L0 522 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 PKNOX2Q96KN3 472 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 PUS3Q9BZE2 481 aaKnown RBP19.29■□□□□ 0.68
CDCP1-201ENST00000296129 ASAP1Q9ULH1 1129 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 PLCB3Q01970 1234 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 BIRC3Q13489 604 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 PNOCQ13519 176 aa19.29■□□□□ 0.68
CDCP1-201ENST00000296129 PAIP2Q9BPZ3 127 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms