RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 CCDC24Q8N4L8 307 aa23.12■■□□□ 1.29
CXCL16-201ENST00000293778 KIAA1524Q8TCG1 905 aa23.12■■□□□ 1.29
CXCL16-201ENST00000293778 NUP133Q8WUM0 1156 aa23.12■■□□□ 1.29
CXCL16-201ENST00000293778 NHSQ6T4R5 1651 aa23.11■■□□□ 1.29
CXCL16-201ENST00000293778 ZRSR1Q15695 479 aaKnown RBP23.11■■□□□ 1.29
CXCL16-201ENST00000293778 DNTTIP2Q5QJE6 756 aaKnown RBP23.11■■□□□ 1.29
CXCL16-201ENST00000293778 CCDC186Q7Z3E2 898 aa23.11■■□□□ 1.29
CXCL16-201ENST00000293778 NBPF11Q86T75 865 aa23.11■■□□□ 1.29
CXCL16-201ENST00000293778 CRACR2BQ8N4Y2 399 aaPredicted RBP23.11■■□□□ 1.29
CXCL16-201ENST00000293778 FANCBQ8NB91 859 aa23.11■■□□□ 1.29
CXCL16-201ENST00000293778 USP21Q9UK80 565 aa23.11■■□□□ 1.29
CXCL16-201ENST00000293778 PYCARDQ9ULZ3 195 aa23.11■■□□□ 1.29
CXCL16-201ENST00000293778 TNKSO95271 1327 aa23.11■■□□□ 1.29
CXCL16-201ENST00000293778 PDS5AQ29RF7 1337 aaKnown RBP23.11■■□□□ 1.29
CXCL16-201ENST00000293778 SMIM22K7EJ46 135 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 MMP1P03956 469 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 CDC25BP30305 580 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 HIBADHP31937 336 aaKnown RBP23.1■■□□□ 1.29
CXCL16-201ENST00000293778 SAFBQ15424 915 aaKnown RBP eCLIP23.1■■□□□ 1.29
CXCL16-201ENST00000293778 SEC23AQ15436 765 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 DEXIO95424 95 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 SLC3A2P08195 630 aaKnown RBP23.1■■□□□ 1.29
CXCL16-201ENST00000293778 FAM182BQ5T319 152 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 NOSTRINQ8IVI9 506 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 NSUN4Q96CB9 384 aaKnown RBP23.1■■□□□ 1.29
CXCL16-201ENST00000293778 TFCP2L1Q9NZI6 479 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 CLIP2Q9UDT6 1046 aa23.1■■□□□ 1.29
CXCL16-201ENST00000293778 CCDC82Q8N4S0 544 aa23.09■■□□□ 1.29
CXCL16-201ENST00000293778 ARHGEF1Q92888 912 aaKnown RBP23.09■■□□□ 1.29
CXCL16-201ENST00000293778 FBXW7Q969H0 707 aa23.09■■□□□ 1.29
CXCL16-201ENST00000293778 DUOX1Q9NRD9 1551 aa23.09■■□□□ 1.29
CXCL16-201ENST00000293778 CYP2D7A0A087X1C5 515 aa23.09■■□□□ 1.29
CXCL16-201ENST00000293778 MECOMQ03112 1051 aa23.09■■□□□ 1.29
CXCL16-201ENST00000293778 CMTR1Q8N1G2 835 aaKnown RBP23.09■■□□□ 1.29
CXCL16-201ENST00000293778 NRBP1Q9UHY1 535 aa23.09■■□□□ 1.29
CXCL16-201ENST00000293778 THSD7AQ9UPZ6 1657 aa23.09■■□□□ 1.29
CXCL16-201ENST00000293778 SHC4Q6S5L8 630 aa23.08■■□□□ 1.29
CXCL16-201ENST00000293778 AMIGO3Q86WK7 504 aa23.08■■□□□ 1.29
CXCL16-201ENST00000293778 DIS3L2Q8IYB7 885 aaKnown RBP23.08■■□□□ 1.29
CXCL16-201ENST00000293778 AOPEPQ8N6M6 819 aa23.08■■□□□ 1.29
CXCL16-201ENST00000293778 TIGD1Q96MW7 591 aa23.08■■□□□ 1.29
CXCL16-201ENST00000293778 ZSCAN10Q96SZ4 725 aaPredicted RBP23.08■■□□□ 1.29
CXCL16-201ENST00000293778 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.08■■□□□ 1.29
CXCL16-201ENST00000293778 KCNJ14Q9UNX9 436 aa23.08■■□□□ 1.29
CXCL16-201ENST00000293778 BTBD18B2RXH4 712 aa23.08■■□□□ 1.28
CXCL16-201ENST00000293778 SYKP43405 635 aa23.08■■□□□ 1.28
CXCL16-201ENST00000293778 MRFAP1L1Q96HT8 127 aa23.08■■□□□ 1.28
CXCL16-201ENST00000293778 HPSEQ9Y251 543 aa23.08■■□□□ 1.28
CXCL16-201ENST00000293778 PCP11498 1178 aaKnown RBP23.07■■□□□ 1.28
CXCL16-201ENST00000293778 PPP2R5BQ15173 497 aa23.07■■□□□ 1.28
CXCL16-201ENST00000293778 CTR9Q6PD62 1173 aa23.07■■□□□ 1.28
CXCL16-201ENST00000293778 ENAHQ8N8S7 591 aaPredicted RBP23.07■■□□□ 1.28
CXCL16-201ENST00000293778 BAZ2AQ9UIF9 1905 aaKnown RBP23.06■■□□□ 1.28
CXCL16-201ENST00000293778 MYH13Q9UKX3 1938 aa23.06■■□□□ 1.28
CXCL16-201ENST00000293778 CUTAO60888 179 aa23.06■■□□□ 1.28
CXCL16-201ENST00000293778 TM4SF1P30408 202 aa23.06■■□□□ 1.28
CXCL16-201ENST00000293778 CHAF1AQ13111 956 aaPredicted RBP23.06■■□□□ 1.28
CXCL16-201ENST00000293778 DPCR1Q3MIW9 517 aa23.06■■□□□ 1.28
CXCL16-201ENST00000293778 FAM237AA0A1B0GTK4 181 aa23.06■■□□□ 1.28
CXCL16-201ENST00000293778 NPHP1O15259 732 aa23.06■■□□□ 1.28
CXCL16-201ENST00000293778 FGRP09769 529 aa23.06■■□□□ 1.28
CXCL16-201ENST00000293778 RBM6P78332 1123 aaKnown RBP23.06■■□□□ 1.28
CXCL16-201ENST00000293778 RESP18Q5W5W9 173 aa23.06■■□□□ 1.28
CXCL16-201ENST00000293778 FOXP1Q9H334 677 aaPredicted RBP23.06■■□□□ 1.28
CXCL16-201ENST00000293778 USP17L12C9JPN9 530 aa23.05■■□□□ 1.28
CXCL16-201ENST00000293778 USP17L21D6R901 530 aa23.05■■□□□ 1.28
CXCL16-201ENST00000293778 CLIC6Q96NY7 704 aa23.05■■□□□ 1.28
CXCL16-201ENST00000293778 BPIFA3Q9BQP9 254 aa23.05■■□□□ 1.28
CXCL16-201ENST00000293778 CRNKL1Q9BZJ0 848 aaKnown RBP23.05■■□□□ 1.28
CXCL16-201ENST00000293778 PRDM1O75626 825 aa23.05■■□□□ 1.28
CXCL16-201ENST00000293778 NLRP12P59046 1061 aa23.05■■□□□ 1.28
CXCL16-201ENST00000293778 IFIT1BQ5T764 474 aaKnown RBP23.05■■□□□ 1.28
CXCL16-201ENST00000293778 IQCA1Q86XH1 822 aa23.05■■□□□ 1.28
CXCL16-201ENST00000293778 RNF26Q9BY78 433 aaPredicted RBP23.05■■□□□ 1.28
CXCL16-201ENST00000293778 AATFQ9NY61 560 aaKnown RBP eCLIP23.05■■□□□ 1.28
CXCL16-201ENST00000293778 UQCRHLA0A096LP55 91 aa23.04■■□□□ 1.28
CXCL16-201ENST00000293778 UQCRHP07919 91 aa23.04■■□□□ 1.28
CXCL16-201ENST00000293778 RFC4P35249 363 aa23.04■■□□□ 1.28
CXCL16-201ENST00000293778 BIN1O00499 593 aa23.04■■□□□ 1.28
CXCL16-201ENST00000293778 PRDX5P30044 214 aa23.04■■□□□ 1.28
CXCL16-201ENST00000293778 RILPL1Q5EBL4 403 aa23.04■■□□□ 1.28
CXCL16-201ENST00000293778 CATIPQ7Z7H3 387 aa23.04■■□□□ 1.28
CXCL16-201ENST00000293778 TOB1P50616 345 aaPredicted RBP23.03■■□□□ 1.28
CXCL16-201ENST00000293778 AKAP17AQ02040 695 aaKnown RBP23.03■■□□□ 1.28
CXCL16-201ENST00000293778 LRMPQ12912 555 aa23.03■■□□□ 1.28
CXCL16-201ENST00000293778 TXNRD3Q86VQ6 643 aa23.03■■□□□ 1.28
CXCL16-201ENST00000293778 KRI1Q8N9T8 703 aaKnown RBP23.03■■□□□ 1.28
CXCL16-201ENST00000293778 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
CXCL16-201ENST00000293778 MYH2Q9UKX2 1941 aa23.03■■□□□ 1.28
CXCL16-201ENST00000293778 CCDC144BQ3MJ40 725 aa23.02■■□□□ 1.28
CXCL16-201ENST00000293778 TRAPPC3LQ5T215 181 aa23.02■■□□□ 1.28
CXCL16-201ENST00000293778 DCP1AQ9NPI6 582 aaPredicted RBP23.02■■□□□ 1.28
CXCL16-201ENST00000293778 TNRC6CQ9HCJ0 1690 aaKnown RBP23.02■■□□□ 1.28
CXCL16-201ENST00000293778 LY75O60449 1722 aa23.02■■□□□ 1.28
CXCL16-201ENST00000293778 TMED8Q6PL24 325 aaPredicted RBP23.02■■□□□ 1.28
CXCL16-201ENST00000293778 ATP8A2Q9NTI2 1148 aa23.02■■□□□ 1.28
CXCL16-201ENST00000293778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.02■■□□□ 1.28
CXCL16-201ENST00000293778 MAST2Q6P0Q8 1798 aa23.02■■□□□ 1.28
CXCL16-201ENST00000293778 SPATA31A6Q5VVP1 1343 aa23.02■■□□□ 1.28
CXCL16-201ENST00000293778 NR5A1Q13285 461 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms