RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 RBM17Q96I25 401 aaKnown RBP16.51■□□□□ 0.23
SEC16A-202ENST00000290037 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 ITSN1Q15811 1721 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
SEC16A-202ENST00000290037 RUBCNQ92622 972 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 MRFAP1L1Q96HT8 127 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 P4HA1P13674 534 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 MNAT1P51948 309 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 RCAN1P53805 252 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 FLAD1Q8NFF5 587 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 MEIS3Q99687 375 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 LRRC59Q96AG4 307 aaKnown RBP16.51■□□□□ 0.23
SEC16A-202ENST00000290037 EVI5O60447 810 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 ZBTB7BO15156 539 aaPredicted RBP16.51■□□□□ 0.23
SEC16A-202ENST00000290037 AK2P54819 239 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 GRK7Q8WTQ7 553 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
SEC16A-202ENST00000290037 ATP5JP18859 108 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 NLRP12P59046 1061 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
SEC16A-202ENST00000290037 AOPEPQ8N6M6 819 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 A0A1W2PQ27 194 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 A0A1W2PQ64 194 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 A0A1W2PQD8 194 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
SEC16A-202ENST00000290037 PODNQ7Z5L7 613 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 OSBPL3Q9H4L5 887 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 F6X3S4 739 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 CIB2O75838 187 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 HAUS1Q96CS2 278 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 TSNAXIP1Q2TAA8 658 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 AK8Q96MA6 479 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
SEC16A-202ENST00000290037 USP32Q8NFA0 1604 aa16.5■□□□□ 0.23
SEC16A-202ENST00000290037 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
SEC16A-202ENST00000290037 DAAM1Q9Y4D1 1078 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 ZNF500O60304 480 aaPredicted RBP16.49■□□□□ 0.23
SEC16A-202ENST00000290037 PTCD1O75127 700 aaKnown RBP16.49■□□□□ 0.23
SEC16A-202ENST00000290037 CCDC6Q16204 474 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 PPP1R12CQ9BZL4 782 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 ABCA9Q8IUA7 1624 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 SH3TC1Q8TE82 1336 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 CAPN2P17655 700 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 RNASELQ05823 741 aaKnown RBP16.49■□□□□ 0.23
SEC16A-202ENST00000290037 SLFN12Q8IYM2 578 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 LPIN2Q92539 896 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 CHMP4BP1P59074 171 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 LMNB2Q03252 620 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 AFAP1L1Q8TED9 768 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 CETN3O15182 167 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 CCHCR1Q8TD31 782 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 PHACTR2O75167 634 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 MAP7D1Q3KQU3 841 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 KCNH3Q9ULD8 1083 aa16.49■□□□□ 0.23
SEC16A-202ENST00000290037 CIAO1O76071 339 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 TRIM11Q96F44 468 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 SAMM50Q9Y512 469 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 PDE8AO60658 829 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 METTL14Q9HCE5 456 aaKnown RBP16.48■□□□□ 0.23
SEC16A-202ENST00000290037 PFDN4Q9NQP4 134 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 PAK1Q13153 545 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 ADALQ6DHV7 355 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 CCDC186Q7Z3E2 898 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 KRT26Q7Z3Y9 468 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 TTC31Q49AM3 519 aaPredicted RBP16.48■□□□□ 0.23
SEC16A-202ENST00000290037 LEO1Q8WVC0 666 aaPredicted RBP16.48■□□□□ 0.23
SEC16A-202ENST00000290037 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
SEC16A-202ENST00000290037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.234e-6■■■■■ 58.9
SEC16A-202ENST00000290037 WDR19Q8NEZ3 1342 aa16.48■□□□□ 0.23
SEC16A-202ENST00000290037 INF2Q27J81 1249 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
SEC16A-202ENST00000290037 DDAH1O94760 285 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 HSPA6P17066 643 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 CPLX4Q7Z7G2 160 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 C6orf229H3BNL8 230 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 COPS6Q7L5N1 327 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 HACE1Q8IYU2 909 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 RTEL1Q9NZ71 1219 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 PRPF4BQ13523 1007 aaKnown RBP16.47■□□□□ 0.23
SEC16A-202ENST00000290037 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 LMNTD2Q8IXW0 634 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 MAK16Q9BXY0 300 aaKnown RBP16.47■□□□□ 0.23
SEC16A-202ENST00000290037 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
SEC16A-202ENST00000290037 DNM1Q05193 864 aaKnown RBP16.47■□□□□ 0.23
SEC16A-202ENST00000290037 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
SEC16A-202ENST00000290037 RASSF4Q9H2L5 321 aa16.47■□□□□ 0.23
SEC16A-202ENST00000290037 RAB3IPQ96QF0 476 aaPredicted RBP16.46■□□□□ 0.23
SEC16A-202ENST00000290037 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
SEC16A-202ENST00000290037 CCDC122Q5T0U0 273 aa16.46■□□□□ 0.23
SEC16A-202ENST00000290037 MED23Q9ULK4 1368 aa16.46■□□□□ 0.23
SEC16A-202ENST00000290037 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
SEC16A-202ENST00000290037 CDC37Q16543 378 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms