RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 USP17L3A6NCW0 530 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 USP17L4A6NCW7 530 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 METAP2P50579 478 aaKnown RBP eCLIP22.82■■□□□ 1.24
C11orf49-201ENST00000278460 SEC23AQ15436 765 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 SOGA3Q5TF21 947 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 USP17L1Q7RTZ2 530 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 UPF1Q92900 1129 aaKnown RBP eCLIP22.82■■□□□ 1.241e-6■■■■□ 24.1
C11orf49-201ENST00000278460 DDX11Q96FC9 970 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 MXD3Q9BW11 206 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 MRIQ9BWK5 157 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 PPIP5K2O43314 1243 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 RCAN1P53805 252 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 EVX2Q03828 476 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 R3HDM1Q15032 1099 aaKnown RBP22.82■■□□□ 1.24
C11orf49-201ENST00000278460 MAPKAPK5Q8IW41 473 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 ZKSCAN3Q9BRR0 538 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 KCNQ5Q9NR82 932 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 SLC12A7Q9Y666 1083 aa22.82■■□□□ 1.24
C11orf49-201ENST00000278460 F8W031 263 aaPredicted RBP22.81■■□□□ 1.24
C11orf49-201ENST00000278460 RANBP6O60518 1105 aaKnown RBP22.81■■□□□ 1.24
C11orf49-201ENST00000278460 FLT1P17948 1338 aa22.81■■□□□ 1.24
C11orf49-201ENST00000278460 SYNE3Q6ZMZ3 975 aa22.81■■□□□ 1.24
C11orf49-201ENST00000278460 CDC37L1Q7L3B6 337 aa22.81■■□□□ 1.24
C11orf49-201ENST00000278460 IQCA1Q86XH1 822 aa22.81■■□□□ 1.24
C11orf49-201ENST00000278460 TEKT1Q969V4 418 aa22.81■■□□□ 1.24
C11orf49-201ENST00000278460 VPS33BQ9H267 617 aa22.81■■□□□ 1.24
C11orf49-201ENST00000278460 LMBRD1Q9NUN5 540 aa22.81■■□□□ 1.24
C11orf49-201ENST00000278460 PIM2Q9P1W9 311 aa22.81■■□□□ 1.24
C11orf49-201ENST00000278460 TNKSO95271 1327 aa22.8■■□□□ 1.24
C11orf49-201ENST00000278460 CPLX1O14810 134 aa22.8■■□□□ 1.24
C11orf49-201ENST00000278460 PRDM1O75626 825 aa22.8■■□□□ 1.24
C11orf49-201ENST00000278460 HDLBPQ00341 1268 aaKnown RBP22.8■■□□□ 1.24
C11orf49-201ENST00000278460 ZSCAN10Q96SZ4 725 aaPredicted RBP22.8■■□□□ 1.24
C11orf49-201ENST00000278460 POLR3DP05423 398 aaPredicted RBP22.79■■□□□ 1.24
C11orf49-201ENST00000278460 CPLX2Q6PUV4 134 aaKnown RBP22.79■■□□□ 1.24
C11orf49-201ENST00000278460 MICU3Q86XE3 530 aa22.79■■□□□ 1.24
C11orf49-201ENST00000278460 RAB11FIP4Q86YS3 637 aa22.79■■□□□ 1.24
C11orf49-201ENST00000278460 GOLGA8AA7E2F4 631 aa22.79■■□□□ 1.24
C11orf49-201ENST00000278460 CDKL5O76039 1030 aa22.79■■□□□ 1.24
C11orf49-201ENST00000278460 FDPSP14324 419 aaKnown RBP22.79■■□□□ 1.24
C11orf49-201ENST00000278460 CHAMP1Q96JM3 812 aa22.79■■□□□ 1.24
C11orf49-201ENST00000278460 H3BQV1 296 aa22.78■■□□□ 1.24
C11orf49-201ENST00000278460 CRKP46108 304 aa22.78■■□□□ 1.24
C11orf49-201ENST00000278460 IFFO2Q5TF58 517 aa22.78■■□□□ 1.24
C11orf49-201ENST00000278460 ENAHQ8N8S7 591 aaPredicted RBP22.78■■□□□ 1.24
C11orf49-201ENST00000278460 SGIP1Q9BQI5 828 aa22.78■■□□□ 1.24
C11orf49-201ENST00000278460 ARFGEF1Q9Y6D6 1849 aa22.77■■□□□ 1.24
C11orf49-201ENST00000278460 CDC27P30260 824 aa22.77■■□□□ 1.24
C11orf49-201ENST00000278460 SCNN1DP51172 638 aa22.77■■□□□ 1.24
C11orf49-201ENST00000278460 ZNF654Q8IZM8 581 aa22.77■■□□□ 1.24
C11orf49-201ENST00000278460 RGS22Q8NE09 1264 aa22.77■■□□□ 1.24
C11orf49-201ENST00000278460 ZDHHC15Q96MV8 337 aa22.77■■□□□ 1.24
C11orf49-201ENST00000278460 FAM217BQ9NTX9 383 aaPredicted RBP22.77■■□□□ 1.24
C11orf49-201ENST00000278460 SAP30BPQ9UHR5 308 aaKnown RBP22.77■■□□□ 1.24
C11orf49-201ENST00000278460 YDJCA8MPS7 323 aa22.76■■□□□ 1.23
C11orf49-201ENST00000278460 RXRAP19793 462 aa22.76■■□□□ 1.23
C11orf49-201ENST00000278460 ADD1P35611 737 aaKnown RBP22.76■■□□□ 1.23
C11orf49-201ENST00000278460 PLCD1P51178 756 aa22.76■■□□□ 1.23
C11orf49-201ENST00000278460 ZNF287Q9HBT7 754 aa22.76■■□□□ 1.23
C11orf49-201ENST00000278460 ORC3Q9UBD5 711 aaPredicted RBP22.76■■□□□ 1.23
C11orf49-201ENST00000278460 PRPF40AO75400 957 aaKnown RBP22.75■■□□□ 1.23
C11orf49-201ENST00000278460 PPP2R5BQ15173 497 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 NTRK3Q16288 839 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 IFIT1BQ5T764 474 aaKnown RBP22.75■■□□□ 1.23
C11orf49-201ENST00000278460 APOBEC3HQ6NTF7 200 aaKnown RBP22.75■■□□□ 1.23
C11orf49-201ENST00000278460 C16orf86Q6ZW13 317 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 KIAA0825Q8IV33 1275 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 TMEM87AQ8NBN3 555 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 DYNLL2Q96FJ2 89 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 MYL10Q9BUA6 226 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 USP40Q9NVE5 1235 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 CD2APQ9Y5K6 639 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 COL4A5P29400 1685 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 TSPY2A6NKD2 308 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 WDHD1O75717 1129 aaPredicted RBP22.75■■□□□ 1.23
C11orf49-201ENST00000278460 RTN1Q16799 776 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 KLHL40Q2TBA0 621 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 SLC4A8Q2Y0W8 1093 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 DALRD3Q5D0E6 543 aaKnown RBP22.75■■□□□ 1.23
C11orf49-201ENST00000278460 CDC42EP5Q6NZY7 148 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 MKNK2Q9HBH9 465 aa22.75■■□□□ 1.23
C11orf49-201ENST00000278460 STK36Q9NRP7 1315 aa22.74■■□□□ 1.23
C11orf49-201ENST00000278460 CCDC196A0A1B0GTZ2 297 aa22.74■■□□□ 1.23
C11orf49-201ENST00000278460 RESTQ13127 1097 aa22.74■■□□□ 1.23
C11orf49-201ENST00000278460 FOXD4L6Q3SYB3 417 aaPredicted RBP22.74■■□□□ 1.23
C11orf49-201ENST00000278460 CCDC178Q5BJE1 867 aa22.74■■□□□ 1.23
C11orf49-201ENST00000278460 FOXD4L3Q6VB84 417 aaPredicted RBP22.74■■□□□ 1.23
C11orf49-201ENST00000278460 LARGE2Q8N3Y3 721 aa22.74■■□□□ 1.23
C11orf49-201ENST00000278460 ZSCAN16Q9H4T2 348 aaPredicted RBP22.74■■□□□ 1.23
C11orf49-201ENST00000278460 SERPINA10Q9UK55 444 aa22.74■■□□□ 1.23
C11orf49-201ENST00000278460 MYO3BQ8WXR4 1341 aa22.73■■□□□ 1.23
C11orf49-201ENST00000278460 IFNAR1P17181 557 aa22.73■■□□□ 1.23
C11orf49-201ENST00000278460 FAM47AQ5JRC9 791 aa22.73■■□□□ 1.23
C11orf49-201ENST00000278460 FERMT3Q86UX7 667 aa22.73■■□□□ 1.23
C11orf49-201ENST00000278460 CCDC144CPQ8IYA2 1237 aa22.73■■□□□ 1.23
C11orf49-201ENST00000278460 ZNF277Q9NRM2 450 aaPredicted RBP22.73■■□□□ 1.23
C11orf49-201ENST00000278460 DDX49Q9Y6V7 483 aaKnown RBP22.73■■□□□ 1.23
C11orf49-201ENST00000278460 SIPA1L1O43166 1804 aa22.73■■□□□ 1.23
C11orf49-201ENST00000278460 CALM1P0DP23 149 aa22.72■■□□□ 1.23
C11orf49-201ENST00000278460 CALM2P0DP24 149 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms