RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 HLFQ16534 295 aa19.55■□□□□ 0.72
SPG7-201ENST00000268704 DIS3L2Q8IYB7 885 aaKnown RBP19.55■□□□□ 0.72
SPG7-201ENST00000268704 ZSWIM4Q9H7M6 989 aa19.55■□□□□ 0.72
SPG7-201ENST00000268704 SLC12A7Q9Y666 1083 aa19.55■□□□□ 0.72
SPG7-201ENST00000268704 PCCAP05165 728 aaPredicted RBP19.54■□□□□ 0.72
SPG7-201ENST00000268704 CSF1RP07333 972 aa19.54■□□□□ 0.72
SPG7-201ENST00000268704 AIDAQ96BJ3 306 aa19.54■□□□□ 0.72
SPG7-201ENST00000268704 PCDHB6Q9Y5E3 794 aa19.54■□□□□ 0.72
SPG7-201ENST00000268704 SSRP1Q08945 709 aaKnown RBP19.54■□□□□ 0.72
SPG7-201ENST00000268704 IRX5P78411 483 aaPredicted RBP19.53■□□□□ 0.72
SPG7-201ENST00000268704 ZBTB38Q8NAP3 1195 aaPredicted RBP19.53■□□□□ 0.72
SPG7-201ENST00000268704 TOMM22Q9NS69 142 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 PPP2R3AQ06190 1150 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 SPECC1LQ69YQ0 1117 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 DNAJC10Q8IXB1 793 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 TTLL11Q8NHH1 800 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 DHX58Q96C10 678 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 MRPL44Q9H9J2 332 aaKnown RBP19.53■□□□□ 0.72
SPG7-201ENST00000268704 FBXO2Q9UK22 296 aaPredicted RBP19.53■□□□□ 0.72
SPG7-201ENST00000268704 ERVV-2B6SEH9 535 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 TBC1D8O95759 1140 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 ZNF18P17022 549 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 CASP1P29466 404 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 CYP2C19P33261 490 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 TAF3Q5VWG9 929 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 OXER1Q8TDS5 423 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 TMEM87BQ96K49 555 aa19.53■□□□□ 0.72
SPG7-201ENST00000268704 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
SPG7-201ENST00000268704 TEX13AQ9BXU3 409 aaPredicted RBP19.53■□□□□ 0.72
SPG7-201ENST00000268704 CCDC66A2RUB6 948 aa19.52■□□□□ 0.72
SPG7-201ENST00000268704 KIFC2Q96AC6 838 aa19.52■□□□□ 0.72
SPG7-201ENST00000268704 SRRTQ9BXP5 876 aaKnown RBP19.52■□□□□ 0.72
SPG7-201ENST00000268704 ARMT1Q9H993 441 aa19.52■□□□□ 0.72
SPG7-201ENST00000268704 TCRBV5S4A2TA0A5A2 114 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 SOWAHDA6NJG2 315 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 PRKAB2O43741 272 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 MMP1P03956 469 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 MAP3K9P80192 1104 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 FCHSD1Q86WN1 690 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 NEK11Q8NG66 645 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 FBXO3Q9UK99 471 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 MRFAP1Q9Y605 127 aa19.52■□□□□ 0.71
SPG7-201ENST00000268704 MBD4O95243 580 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 ST5P78524 1137 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 KIF6Q6ZMV9 814 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 SGMS1Q86VZ5 419 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 VGLL2Q8N8G2 317 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 ATRNO75882 1429 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 TNS3Q68CZ2 1445 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 TEX33O43247 280 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 FMNL1O95466 1100 aaPredicted RBP19.51■□□□□ 0.71
SPG7-201ENST00000268704 UBE3CQ15386 1083 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 CC2D1AQ6P1N0 951 aaPredicted RBP19.51■□□□□ 0.71
SPG7-201ENST00000268704 CPLX3Q8WVH0 158 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 SMARCE1Q969G3 411 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 MPHOSPH8Q99549 860 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 NAPBQ9H115 298 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 LZTFL1Q9NQ48 299 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 ASAP1Q9ULH1 1129 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 ABCC12Q96J65 1359 aa19.51■□□□□ 0.71
SPG7-201ENST00000268704 FAM205CA6NFA0 338 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 STX17P56962 302 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 KLHL10Q6JEL2 608 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 IFNL3Q8IZI9 196 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 MAGEB6Q8N7X4 407 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 STX10O60499 249 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 PRDM11Q9NQV5 511 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 COBLO75128 1261 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 GYS2P54840 703 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 MORC3Q14149 939 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 CCDC12Q8WUD4 166 aaPredicted RBP19.5■□□□□ 0.71
SPG7-201ENST00000268704 RAI14Q9P0K7 980 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.5■□□□□ 0.71
SPG7-201ENST00000268704 TBC1D2BQ9UPU7 963 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 CHD4Q14839 1912 aa19.5■□□□□ 0.71
SPG7-201ENST00000268704 PTPREP23469 700 aa19.49■□□□□ 0.71
SPG7-201ENST00000268704 PLA2G12BQ9BX93 195 aa19.49■□□□□ 0.71
SPG7-201ENST00000268704 PARD6BQ9BYG5 372 aa19.49■□□□□ 0.71
SPG7-201ENST00000268704 TFRCP02786 760 aaKnown RBP19.49■□□□□ 0.71
SPG7-201ENST00000268704 OAS2P29728 719 aaKnown RBP19.49■□□□□ 0.71
SPG7-201ENST00000268704 CTSWP56202 376 aa19.49■□□□□ 0.71
SPG7-201ENST00000268704 TTF1Q15361 905 aaPredicted RBP19.49■□□□□ 0.71
SPG7-201ENST00000268704 SMYD4Q8IYR2 804 aaPredicted RBP19.49■□□□□ 0.71
SPG7-201ENST00000268704 CSRNP2Q9H175 543 aa19.49■□□□□ 0.71
SPG7-201ENST00000268704 PAPPAQ13219 1627 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 ANKRD18BA2A2Z9 1011 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 PDE8BO95263 885 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 AFMP43652 599 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 SARSP49591 514 aaKnown RBP19.48■□□□□ 0.71
SPG7-201ENST00000268704 NUP133Q8WUM0 1156 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 A0A087X0B3 334 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 ACTN4O43707 911 aaKnown RBP19.48■□□□□ 0.71
SPG7-201ENST00000268704 HNRNPH2P55795 449 aaKnown RBP19.48■□□□□ 0.71
SPG7-201ENST00000268704 SAFBQ15424 915 aaKnown RBP eCLIP19.48■□□□□ 0.71
SPG7-201ENST00000268704 NLRP10Q86W26 655 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 ENOX1Q8TC92 643 aaKnown RBP19.48■□□□□ 0.71
SPG7-201ENST00000268704 WDR17Q8IZU2 1322 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 SMIM22K7EJ46 135 aa19.48■□□□□ 0.71
SPG7-201ENST00000268704 IFNAR1P17181 557 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms