RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CTAGE4Q8IX94 777 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
XRCC1-201ENST00000262887 DRC1Q96MC2 740 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 DEF6Q9H4E7 631 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 ZMYM6O95789 1325 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 ANKRD65E5RJM6 399 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 ZNF213O14771 459 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 SIPA1L3O60292 1781 aaPredicted RBP17.03■□□□□ 0.32
XRCC1-201ENST00000262887 PPFIA4O75335 1185 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 RXRAP19793 462 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 TRIM29Q14134 588 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 CT47A1Q5JQC4 288 aaPredicted RBP17.03■□□□□ 0.32
XRCC1-201ENST00000262887 EFCAB13Q8IY85 973 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 GPATCH11Q8N954 259 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 BANK1Q8NDB2 785 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 PHKBQ93100 1093 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 C5P01031 1676 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 IL15P40933 162 aaPredicted RBP17.03■□□□□ 0.32
XRCC1-201ENST00000262887 CPLX2Q6PUV4 134 aaKnown RBP17.03■□□□□ 0.32
XRCC1-201ENST00000262887 ELOA2Q8IYF1 753 aaPredicted RBP17.03■□□□□ 0.32
XRCC1-201ENST00000262887 CPLX3Q8WVH0 158 aa17.03■□□□□ 0.32
XRCC1-201ENST00000262887 A0A1B0GTH6 734 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 LRRIQ3A6PVS8 624 aaPredicted RBP17.02■□□□□ 0.32
XRCC1-201ENST00000262887 PIP4K2BP78356 416 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 WHAMMP3Q1A5X7 153 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 SLC35F6Q8N357 371 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 NWD2Q9ULI1 1742 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 CPDO75976 1380 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.32
XRCC1-201ENST00000262887 CASP7P55210 303 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 RBL2Q08999 1139 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 TRDNQ13061 729 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 HSP90AB3PQ58FF7 597 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 RASGRP2Q7LDG7 609 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 PLEKHA4Q9H4M7 779 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 CEP83Q9Y592 693 aa17.02■□□□□ 0.32
XRCC1-201ENST00000262887 CPP00450 1065 aa17.02■□□□□ 0.31
XRCC1-201ENST00000262887 TFRCP02786 760 aaKnown RBP17.02■□□□□ 0.31
XRCC1-201ENST00000262887 KCNA6P17658 529 aa17.02■□□□□ 0.31
XRCC1-201ENST00000262887 MORC3Q14149 939 aa17.02■□□□□ 0.31
XRCC1-201ENST00000262887 LRP10Q7Z4F1 713 aa17.02■□□□□ 0.31
XRCC1-201ENST00000262887 AFAP1L1Q8TED9 768 aa17.02■□□□□ 0.31
XRCC1-201ENST00000262887 ANGEL1Q9UNK9 670 aaKnown RBP17.02■□□□□ 0.31
XRCC1-201ENST00000262887 C4AP0C0L4 1744 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 WDR19Q8NEZ3 1342 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 POLR2DO15514 142 aaKnown RBP17.01■□□□□ 0.31
XRCC1-201ENST00000262887 TEX33O43247 280 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 RNF40O75150 1001 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 NT5DC1Q5TFE4 455 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
XRCC1-201ENST00000262887 NAPGQ99747 312 aaPredicted RBP17.01■□□□□ 0.31
XRCC1-201ENST00000262887 CCDC172P0C7W6 258 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 FOXO4P98177 505 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 LRRC24Q50LG9 513 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 DNAJC21Q5F1R6 531 aaKnown RBP17.01■□□□□ 0.31
XRCC1-201ENST00000262887 MED15Q96RN5 788 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 SERTAD1Q9UHV2 236 aa17.01■□□□□ 0.31
XRCC1-201ENST00000262887 SLC9C2Q5TAH2 1124 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 MICU3Q86XE3 530 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 SUGP1Q8IWZ8 645 aaKnown RBP17■□□□□ 0.31
XRCC1-201ENST00000262887 GRAMD1CQ8IYS0 662 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 TRIML1Q8N9V2 468 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 ZFYP08048 801 aaPredicted RBP17■□□□□ 0.31
XRCC1-201ENST00000262887 SARSP49591 514 aaKnown RBP17■□□□□ 0.31
XRCC1-201ENST00000262887 PLCD1P51178 756 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 WDR93Q6P2C0 686 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 EP400NLQ6ZTU2 488 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 CTCFLQ8NI51 663 aaPredicted RBP17■□□□□ 0.31
XRCC1-201ENST00000262887 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
XRCC1-201ENST00000262887 VIPAS39Q9H9C1 493 aa17■□□□□ 0.31
XRCC1-201ENST00000262887 TTF2Q9UNY4 1162 aaKnown RBP17■□□□□ 0.31
XRCC1-201ENST00000262887 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
XRCC1-201ENST00000262887 TADA2BQ86TJ2 420 aa16.99■□□□□ 0.31
XRCC1-201ENST00000262887 MAP3K15Q6ZN16 1313 aa16.99■□□□□ 0.31
XRCC1-201ENST00000262887 A0A087WUV0 522 aaPredicted RBP16.99■□□□□ 0.31
XRCC1-201ENST00000262887 EYA2O00167 538 aa16.99■□□□□ 0.31
XRCC1-201ENST00000262887 AARSP49588 968 aaKnown RBP eCLIP16.99■□□□□ 0.31
XRCC1-201ENST00000262887 STK11IPQ8N1F8 1099 aa16.99■□□□□ 0.31
XRCC1-201ENST00000262887 NOA1Q8NC60 698 aaKnown RBP16.99■□□□□ 0.31
XRCC1-201ENST00000262887 ZNF594Q96JF6 807 aaPredicted RBP16.99■□□□□ 0.31
XRCC1-201ENST00000262887 PUS7LQ9H0K6 701 aaKnown RBP16.99■□□□□ 0.31
XRCC1-201ENST00000262887 MFAP3LO75121 409 aa16.98■□□□□ 0.31
XRCC1-201ENST00000262887 ERCC5P28715 1186 aaPredicted RBP16.98■□□□□ 0.31
XRCC1-201ENST00000262887 GRIN1Q05586 938 aa16.98■□□□□ 0.31
XRCC1-201ENST00000262887 APOA5Q6Q788 366 aa16.98■□□□□ 0.31
XRCC1-201ENST00000262887 MMS22LQ6ZRQ5 1243 aa16.98■□□□□ 0.31
XRCC1-201ENST00000262887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.98■□□□□ 0.31
XRCC1-201ENST00000262887 APPBP2Q92624 585 aa16.98■□□□□ 0.31
XRCC1-201ENST00000262887 DENND2AQ9ULE3 1009 aa16.98■□□□□ 0.31
XRCC1-201ENST00000262887 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
XRCC1-201ENST00000262887 DDX60Q8IY21 1712 aaKnown RBP16.98■□□□□ 0.31
XRCC1-201ENST00000262887 SYF2O95926 243 aaKnown RBP16.98■□□□□ 0.31
XRCC1-201ENST00000262887 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
XRCC1-201ENST00000262887 EIF5P55010 431 aaKnown RBP16.98■□□□□ 0.31
XRCC1-201ENST00000262887 FAM107BQ9H098 131 aa16.98■□□□□ 0.31
XRCC1-201ENST00000262887 CASP14P31944 242 aa16.97■□□□□ 0.31
XRCC1-201ENST00000262887 ACRBPQ8NEB7 543 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms