RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
CTSC-201ENST00000227266 TRDNQ13061 729 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 CRACR2BQ8N4Y2 399 aaPredicted RBP13.17□□□□□ -0.3
CTSC-201ENST00000227266 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
CTSC-201ENST00000227266 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
CTSC-201ENST00000227266 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 SERPINB13Q9UIV8 391 aa13.17□□□□□ -0.3
CTSC-201ENST00000227266 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
CTSC-201ENST00000227266 PDE4BQ07343 736 aa13.16□□□□□ -0.3
CTSC-201ENST00000227266 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
CTSC-201ENST00000227266 RALYLQ86SE5 291 aaKnown RBP13.16□□□□□ -0.3
CTSC-201ENST00000227266 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
CTSC-201ENST00000227266 NEK1Q96PY6 1258 aa13.16□□□□□ -0.3
CTSC-201ENST00000227266 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
CTSC-201ENST00000227266 ATRNL1Q5VV63 1379 aa13.16□□□□□ -0.3
CTSC-201ENST00000227266 PITPNM2Q9BZ72 1349 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 FAM196BA6NMK8 535 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 CPA1P15085 419 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 PSMA5P28066 241 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 COL9A3Q14050 684 aaPredicted RBP13.15□□□□□ -0.3
CTSC-201ENST00000227266 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 ZC3H15Q8WU90 426 aaKnown RBP13.15□□□□□ -0.3
CTSC-201ENST00000227266 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 ROBO3Q96MS0 1386 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 B4E1Z4 1266 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 CDK8P49336 464 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 C16orf86Q6ZW13 317 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 NCOA7Q8NI08 942 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 EHD4Q9H223 541 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
CTSC-201ENST00000227266 BAZ2AQ9UIF9 1905 aaKnown RBP13.14□□□□□ -0.31
CTSC-201ENST00000227266 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 ADM5C9JUS6 153 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
CTSC-201ENST00000227266 KDM4AO75164 1064 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 GABPAQ06546 454 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 RABEP1Q15276 862 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 BLOC1S2Q6QNY1 142 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 DLK2Q6UY11 383 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 MIGA2Q7L4E1 593 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
CTSC-201ENST00000227266 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 TCEANC2Q96MN5 208 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 TEPSINQ96N21 525 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 KRT23Q9C075 422 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTSC-201ENST00000227266 CYP46A1Q9Y6A2 500 aa13.14□□□□□ -0.31
CTSC-201ENST00000227266 COL2A1P02458 1487 aaPredicted RBP13.14□□□□□ -0.31
CTSC-201ENST00000227266 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 DEKP35659 375 aaKnown RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 NEK4P51957 841 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 NBR1Q14596 966 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 NBPF12Q5TAG4 269 aaPredicted RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 ESR2Q92731 530 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTSC-201ENST00000227266 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 PGAP2Q9UHJ9 254 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 ECM29Q5VYK3 1845 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 ORC4O43929 436 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 FGRP09769 529 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 MAP1SQ66K74 1059 aaPredicted RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 GLIS2Q9BZE0 524 aaPredicted RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
CTSC-201ENST00000227266 SWAP70Q9UH65 585 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
CTSC-201ENST00000227266 DDX60LQ5H9U9 1706 aaKnown RBP13.12□□□□□ -0.31
CTSC-201ENST00000227266 CDK5RAP2Q96SN8 1893 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 SCN4AP35499 1836 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 RASA1P20936 1047 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 MCM5P33992 734 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 SHMT1P34896 483 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 CYB5R4Q7L1T6 521 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 DHX32Q7L7V1 743 aaKnown RBP13.12□□□□□ -0.31
CTSC-201ENST00000227266 LRRC2Q9BYS8 371 aa13.12□□□□□ -0.31
CTSC-201ENST00000227266 HERC5Q9UII4 1024 aaKnown RBP13.12□□□□□ -0.31
CTSC-201ENST00000227266 PRC1O43663 620 aa13.11□□□□□ -0.31
CTSC-201ENST00000227266 FGD1P98174 961 aa13.11□□□□□ -0.31
CTSC-201ENST00000227266 CDC37L1Q7L3B6 337 aa13.11□□□□□ -0.31
CTSC-201ENST00000227266 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
CTSC-201ENST00000227266 LDHDQ86WU2 507 aa13.11□□□□□ -0.31
CTSC-201ENST00000227266 PDRG1Q9NUG6 133 aa13.11□□□□□ -0.31
CTSC-201ENST00000227266 ZSWIM5Q9P217 1185 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms