RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 RSRC2Q7L4I2 434 aaKnown RBP15.52■□□□□ 0.08
GABPB1-201ENST00000220429 CCDC26Q8TAB7 109 aa15.52■□□□□ 0.08
GABPB1-201ENST00000220429 ZKSCAN4Q969J2 545 aaPredicted RBP15.52■□□□□ 0.08
GABPB1-201ENST00000220429 ODF2LQ9ULJ1 636 aa15.52■□□□□ 0.08
GABPB1-201ENST00000220429 SKIDA1Q1XH10 827 aa15.52■□□□□ 0.08
GABPB1-201ENST00000220429 NLRP10Q86W26 655 aa15.52■□□□□ 0.08
GABPB1-201ENST00000220429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.52■□□□□ 0.08
GABPB1-201ENST00000220429 DDX19AQ9NUU7 478 aaKnown RBP15.52■□□□□ 0.08
GABPB1-201ENST00000220429 CPSF2Q9P2I0 782 aaKnown RBP15.52■□□□□ 0.08
GABPB1-201ENST00000220429 DOT1LQ8TEK3 1739 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 VPS37CA5D8V6 355 aaPredicted RBP15.52■□□□□ 0.07
GABPB1-201ENST00000220429 TMCO5BA8MYB1 307 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 MYBL2P10244 700 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 PREPLQ4J6C6 727 aaPredicted RBP15.52■□□□□ 0.07
GABPB1-201ENST00000220429 STOX1Q6ZVD7 989 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 ARMC2Q8NEN0 867 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 XAGE2Q96GT9 111 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 OSBPL5Q9H0X9 879 aaPredicted RBP15.52■□□□□ 0.07
GABPB1-201ENST00000220429 ACBD3Q9H3P7 528 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 SPATS2LQ9NUQ6 558 aaKnown RBP15.52■□□□□ 0.07
GABPB1-201ENST00000220429 FAM169AQ9Y6X4 670 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 CDHR2Q9BYE9 1310 aa15.52■□□□□ 0.07
GABPB1-201ENST00000220429 CHUKO15111 745 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 RTN2O75298 545 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 MRPL12P52815 198 aaKnown RBP15.51■□□□□ 0.07
GABPB1-201ENST00000220429 IFIT5Q13325 482 aaKnown RBP15.51■□□□□ 0.07
GABPB1-201ENST00000220429 HSP90B2PQ58FF3 399 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 LARP1BQ659C4 914 aaKnown RBP15.51■□□□□ 0.07
GABPB1-201ENST00000220429 FAM71BQ8TC56 605 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 CLSTN2Q9H4D0 955 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 MAST3O60307 1309 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 CCP110O43303 1012 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 STK3Q13188 491 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 TRIM65Q6PJ69 517 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 ERCC4Q92889 916 aaPredicted RBP15.51■□□□□ 0.07
GABPB1-201ENST00000220429 DSCC1Q9BVC3 393 aa15.51■□□□□ 0.07
GABPB1-201ENST00000220429 MYH7P12883 1935 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 RIC1Q4ADV7 1423 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 RNF113AO15541 343 aaKnown RBP15.5■□□□□ 0.07
GABPB1-201ENST00000220429 RWDD2BP57060 319 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 Q6ZUG5 572 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 TTC6Q86TZ1 520 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 HNRNPLLQ8WVV9 542 aaKnown RBP15.5■□□□□ 0.07
GABPB1-201ENST00000220429 IMPACTQ9P2X3 320 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 INPP5BP32019 993 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 TTLL11Q8NHH1 800 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 CLIC6Q96NY7 704 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 AKAP11Q9UKA4 1901 aa15.5■□□□□ 0.07
GABPB1-201ENST00000220429 FANCGO15287 622 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 NRDCO43847 1150 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 HSPD1P10809 573 aaKnown RBP15.49■□□□□ 0.07
GABPB1-201ENST00000220429 TXLNAP40222 546 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 PPP2R3AQ06190 1150 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 TRAF1Q13077 416 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 TTC39AQ5SRH9 613 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 BEND6Q5SZJ8 279 aaPredicted RBP15.49■□□□□ 0.07
GABPB1-201ENST00000220429 ISM2Q6H9L7 571 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 CDC37L1Q7L3B6 337 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 BAG1Q99933 345 aaPredicted RBP15.49■□□□□ 0.07
GABPB1-201ENST00000220429 UTP14AQ9BVJ6 771 aaKnown RBP15.49■□□□□ 0.07
GABPB1-201ENST00000220429 GREM2Q9H772 168 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 FAM204AQ9H8W3 233 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 CD248Q9HCU0 757 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 A0A0G2JLW4 131 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 FKBP4Q02790 459 aaKnown RBP eCLIP15.49■□□□□ 0.07
GABPB1-201ENST00000220429 CCDC150Q8NCX0 1101 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 THOC1Q96FV9 657 aaKnown RBP15.49■□□□□ 0.07
GABPB1-201ENST00000220429 LRRC2Q9BYS8 371 aa15.49■□□□□ 0.07
GABPB1-201ENST00000220429 M0R2C6 588 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 EBAG9O00559 213 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 PHACTR2O75167 634 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 COQ9O75208 318 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 ITGA6P23229 1130 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 SCARF1Q14162 830 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 WWC2Q6AWC2 1192 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 IQCA1Q86XH1 822 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 ANKRD18AQ8IVF6 992 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 GOLGA1Q92805 767 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 PSMD1Q99460 953 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 RIPOR2Q9Y4F9 1068 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 EME2A4GXA9 379 aaPredicted RBP15.48■□□□□ 0.07
GABPB1-201ENST00000220429 ICA1Q05084 483 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 OSBP2Q969R2 916 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 CCDC102AQ96A19 550 aa15.48■□□□□ 0.07
GABPB1-201ENST00000220429 ANKRD18BA2A2Z9 1011 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 GOLGA6L4A6NEF3 574 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 BECN2A8MW95 431 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 PDCP20941 246 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 CTSWP56202 376 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 KRT85P78386 507 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 DHX8Q14562 1220 aaKnown RBP15.47■□□□□ 0.07
GABPB1-201ENST00000220429 TBC1D2BQ9UPU7 963 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 MYO5AQ9Y4I1 1855 aaKnown RBP15.47■□□□□ 0.07
GABPB1-201ENST00000220429 NWD2Q9ULI1 1742 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 A0A1B0GUA9 196 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 IRS4O14654 1257 aaPredicted RBP15.47■□□□□ 0.07
GABPB1-201ENST00000220429 SFPQP23246 707 aaKnown RBP eCLIP15.47■□□□□ 0.07
GABPB1-201ENST00000220429 MAP3K9P80192 1104 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 FERMT3Q86UX7 667 aa15.47■□□□□ 0.07
GABPB1-201ENST00000220429 TRMT112Q9UI30 125 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms