RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 KIF5CO60282 957 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 IBSPP21815 317 aaPredicted RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 SFPQP23246 707 aaKnown RBP eCLIP4.81□□□□□ -1.64
CFTR-201ENST00000003084 MICALL2Q8IY33 904 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 TBC1D2Q9BYX2 928 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 GBP3Q9H0R5 595 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 ARMT1Q9H993 441 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 GPR108Q9NPR9 543 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 CDC42BPBQ9Y5S2 1711 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 XDHP47989 1333 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 EIF3JO75822 258 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 RPS6KB1P23443 525 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 PTCH1Q13635 1447 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 KLHL10Q6JEL2 608 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 ARHGEF40Q8TER5 1519 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 DLC1Q96QB1 1528 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 PATL2C9JE40 543 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 IDEP14735 1019 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 ATP5JP18859 108 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 CASQ1P31415 396 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 SCNN1AP37088 669 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 CLK2P49760 499 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 KIF22Q14807 665 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 RAB3GAP1Q15042 981 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 ARHGEF6Q15052 776 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 GPR162Q16538 588 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 RRAGBQ5VZM2 374 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 VASH1Q7L8A9 365 aaPredicted RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 MRPS27Q92552 414 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 DCPSQ96C86 337 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 INTS4Q96HW7 963 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 DSCC1Q9BVC3 393 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 KCNG1Q9UIX4 513 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 SYCE3A1L190 88 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 CD2BP2O95400 341 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 PCP11498 1178 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 KBTBD3Q8NAB2 608 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 GALNT6Q8NCL4 622 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 CCDC112Q8NEF3 446 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 MAP7D2Q96T17 732 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 YIPF4Q9BSR8 244 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.81□□□□□ -1.64
CFTR-201ENST00000003084 ABCC4O15439 1325 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 SCO2A0A1W2PP80 73 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 GAS2O43903 313 aaKnown RBP4.81□□□□□ -1.64
CFTR-201ENST00000003084 BBOX1O75936 387 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 MAPK8P45983 427 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 PLCD1P51178 756 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 NUBP1P53384 320 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 PODNQ7Z5L7 613 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 MSANTD4Q8NCY6 345 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 IL17REQ8NFR9 667 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 CSADQ9Y600 493 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 IVNS1ABPQ9Y6Y0 642 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 DIP2CQ9Y2E4 1556 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 SPATA31A6Q5VVP1 1343 aa4.81□□□□□ -1.64
CFTR-201ENST00000003084 FAM187AA6NFU0 413 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 F13A1P00488 732 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 UBE4AQ14139 1066 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 TMED8Q6PL24 325 aaPredicted RBP4.8□□□□□ -1.64
CFTR-201ENST00000003084 CDAN1Q8IWY9 1227 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 TRIM47Q96LD4 638 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 PLEKHF1Q96S99 279 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.8□□□□□ -1.64
CFTR-201ENST00000003084 IMPG2Q9BZV3 1241 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 ATG3Q9NT62 314 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 SERTAD1Q9UHV2 236 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 EXOC7Q9UPT5 735 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 JCADQ9P266 1359 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 USPL1Q5W0Q7 1092 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 DTHD1Q6ZMT9 781 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 KRT25Q7Z3Z0 450 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 SEPT12Q8IYM1 358 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 ARHGAP9Q9BRR9 750 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 USP40Q9NVE5 1235 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 CWC15Q9P013 229 aaKnown RBP4.8□□□□□ -1.64
CFTR-201ENST00000003084 BCS1LQ9Y276 419 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 POTEB2H3BUK9 544 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 PSMA7O14818 248 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 SLC27A2O14975 620 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 PHACTR2O75167 634 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 PRPHP41219 470 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 MAP3K10Q02779 954 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 SKIDA1Q1XH10 827 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 HAUS3Q68CZ6 603 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 RAB11FIP4Q86YS3 637 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 CLIP2Q9UDT6 1046 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 SWAP70Q9UH65 585 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 GPAA1O43292 621 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 NT5C2P49902 561 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 ADCY7P51828 1080 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 APOBRQ0VD83 1088 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 GRM1Q13255 1194 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 TCERG1LQ5VWI1 586 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 OTUD7BQ6GQQ9 843 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 PADI6Q6TGC4 694 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 Q6ZNB5 142 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 CHURC1Q8WUH1 139 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 KIF12Q96FN5 646 aa4.8□□□□□ -1.64
CFTR-201ENST00000003084 DBNDD2Q9BQY9 259 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms