RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Psma7Q9Z2U0 248 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 EmbP21995 330 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tdo2P48776 406 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tm6sf1P58749 370 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Zfp781Q0P5U5 243 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Esyt2Q3TZZ7 845 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Psmd6Q99JI4 389 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Rilpl1Q9JJC6 406 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Wdr7Q920I9 1489 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Gm6583E9Q8Z1 469 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Atp8a2P98200 1148 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 GabpaQ00422 454 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 HomezQ80W88 542 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 NelfbQ8C4Y3 580 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Cfap74Q3UY96 1578 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Hoxc9P09633 260 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Lonp2Q9DBN5 852 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Q3TYL0 343 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Stxbp3Q60770 592 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Fgd5Q80UZ0 1219 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Mug2P28666 1451 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Esco1Q69Z69 843 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Slc7a6osQ7TPE5 306 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Spata2Q8K004 515 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Taf12Q8VE65 161 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Xpo4Q9ESJ0 1151 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Abcc6Q9R1S7 1498 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 CltaO08585 235 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Swap70Q6A028 585 aaKnown RBP13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ccnt1Q9QWV9 724 aaKnown RBP13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 PcQ05920 1178 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Anks6Q6GQX6 883 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Kif11Q6P9P6 1052 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Slc17a8Q8BFU8 601 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Slc4a8Q8JZR6 1089 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 FibpQ9JI19 357 aa13.79□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Psmc2P46471 433 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Rnf40Q3U319 1001 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 PsdQ5DTT2 1024 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Rbm12b2Q66JV4 834 aaKnown RBP13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Haus6Q6NV99 933 aaKnown RBP13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Slc51bQ80WK2 128 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Kif2bQ8C0N1 668 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Serpinb12Q9D7P9 423 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Pdzd4Q9QY39 772 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Foxo3Q9WVH4 672 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Gipc1Q9Z0G0 333 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Zscan25B2RX31 543 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ccdc110Q3V125 848 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Prdm1Q60636 856 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Cadps2Q8BYR5 1297 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Krt222Q8CCX5 294 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Atp2b4Q6Q477 1205 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Vat1lQ80TB8 417 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Lrrd1Q8C0R9 853 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Cst12Q9DAN8 128 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Angptl3Q9R182 455 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Mtmr7Q9Z2C9 660 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tex13c2A0A0G2JGA3 530 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ap1b1O35643 943 aaKnown RBP13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Lrrc36Q3V0M2 755 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 ErmnQ5EBJ4 281 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tmem87aQ8BXN9 555 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Gys2Q8VCB3 704 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tmem132aQ922P8 1018 aa13.78□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Herc4Q6PAV2 1057 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Apbb1ipQ8R5A3 670 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Cabp7Q91ZM8 215 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Sar1bQ9CQC9 198 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Abcc4E9Q236 1325 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Col20a1Q923P0 1320 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Lrrc7Q80TE7 1490 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Apol11aE9PZG0 334 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tspyl1O88852 379 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 YwhaeP62259 255 aaKnown RBP13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ano8Q6PB70 1060 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Klhl7Q8BUL5 586 aa13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ccdc124Q9D8X2 217 aaKnown RBP13.77□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Lrriq3Q14DL3 633 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Ttll12Q3UDE2 639 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Mis12Q9CY25 206 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Ncf2O70145 525 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Gm5169Q5M8P2 212 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Sestd1Q80UK0 696 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Mettl5Q8K1A0 209 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Zscan18E9PUD6 809 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Kif22Q3V300 660 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Tbc1d9bQ5SVR0 1263 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Rab3gap1Q80UJ7 981 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Trim60Q8VI40 466 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Ssfa2Q922B9 1252 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Drc3Q9D5E4 523 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Krt71Q9R0H5 524 aa13.77□□□□□ -0.21
Ssh1-202ENSMUST00000112298 LpxnQ99N69 386 aa13.76□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Lekr1B2RVN1 116 aa13.76□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Cct5P80316 541 aaKnown RBP13.76□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Iws1Q8C1D8 766 aa13.76□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Hgh1Q8C3I8 393 aa13.76□□□□□ -0.21
Ssh1-202ENSMUST00000112298 Homer2Q9QWW1 354 aa13.76□□□□□ -0.21
Ssh1-202ENSMUST00000112298 3425401B19RikD3Z1D3 1412 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms