RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Sap30bpQ02614 308 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Zfp51Q3U4L8 781 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Mettl5Q8K1A0 209 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Rhpn1Q61085 643 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gpbp1Q6NXH3 473 aaKnown RBP17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Tab2Q99K90 693 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ccnt1Q9QWV9 724 aaKnown RBP17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Flt4P35917 1363 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ccdc121E9Q6D3 323 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Fam83bQ0VBM2 1012 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Fermt2Q8CIB5 680 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Dnajc5P60904 198 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Armc2Q3URY6 854 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Lrrd1Q8C0R9 853 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Lipo1J3QME6 396 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Sept1P42209 366 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Lrrc36Q3V0M2 755 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ccdc42Q5SV66 316 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 AsnsQ61024 561 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 PicalmQ7M6Y3 660 aaKnown RBP17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 Wdr24Q8CFJ9 790 aa17.13■□□□□ 0.33
Usp38-201ENSMUST00000042724 MpndQ3TV65 487 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ccdc73Q8CDM4 1066 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Nrxn1Q9CS84 1514 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Cd3dP04235 173 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Oxr1Q4KMM3 866 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Rnf187Q8BFX1 236 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Emilin1Q99K41 1017 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Pls1Q3V0K9 630 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Mcm7Q61881 719 aaKnown RBP17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Q8BZJ8 459 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Abcc10Q8R4P9 1501 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Abcb4P21440 1276 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Rpl13P47963 211 aaKnown RBP17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Fam178bQ24JP3 464 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Fam228bQ497Q6 232 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 QarsQ8BML9 775 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Erlin1Q91X78 346 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 LpxnQ99N69 386 aa17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Prpf40aQ9R1C7 953 aaKnown RBP17.12■□□□□ 0.33
Usp38-201ENSMUST00000042724 Adcy9P51830 1353 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Rims2Q9EQZ7 1530 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gm5624F6ZZG8 207 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 PpardP35396 440 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Rnf216P58283 853 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Fam76aQ922G2 307 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gja10Q9WUS4 505 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gm5934D3Z4U6 212 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Zbtb7aO88939 569 aaKnown RBP17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gm5592Q3V0A6 857 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Anp32cQ64G17 123 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Def6Q8C2K1 630 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Iqsec2Q5DU25 1478 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Svs3aF2Z472 265 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Hs6st3Q9QYK4 470 aa17.11■□□□□ 0.33
Usp38-201ENSMUST00000042724 Tcerg1lQ3B807 590 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Srp68Q8BMA6 625 aaKnown RBP17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Smc1bQ920F6 1248 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ccdc129Q14B48 1034 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Slc27a1Q60714 646 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Nxf7Q80SZ6 620 aaKnown RBP17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Zfp113Q8C689 439 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Tdo2P48776 406 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Pfkfb1P70266 471 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ctdp1Q7TSG2 960 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ccdc89Q9DA73 370 aa17.1■□□□□ 0.33
Usp38-201ENSMUST00000042724 A0A1W2P6Q8 802 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gm9048A0A1W2P7H4 802 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 A0A1W2P7Z8 802 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gm9046A0A1W2P855 802 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ube3aO08759 870 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gpr108Q91WD0 569 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Arpp21Q9DCB4 807 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 AK157302I3ITR1 129 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 NpeppsQ11011 920 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Isca1Q9D924 129 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Msh6P54276 1358 aaKnown RBP17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Slc38a10Q5I012 1090 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Sept14Q9DA97 430 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Pus3Q9JI38 481 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Krt18P05784 423 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 GnptabQ69ZN6 1235 aa17.09■□□□□ 0.33
Usp38-201ENSMUST00000042724 Pak1O88643 545 aa17.08■□□□□ 0.33
Usp38-201ENSMUST00000042724 Kifap3P70188 793 aa17.08■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ppfibp1Q8C8U0 969 aaKnown RBP17.08■□□□□ 0.33
Usp38-201ENSMUST00000042724 Pym1Q8CHP5 203 aaKnown RBP17.08■□□□□ 0.33
Usp38-201ENSMUST00000042724 Add2Q9QYB8 725 aa17.08■□□□□ 0.33
Usp38-201ENSMUST00000042724 Nlrp5Q9R1M5 1163 aa17.08■□□□□ 0.33
Usp38-201ENSMUST00000042724 Atp10bB1AWN4 1474 aa17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Trim56Q80VI1 734 aaKnown RBP17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Strip1Q8C079 837 aa17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Mindy4Q3UQI9 744 aa17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 McamQ8R2Y2 648 aaKnown RBP17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Bpifb4A2BGH0 617 aa17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 1700018F24RikB2RW27 314 aa17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Zfp42P22227 288 aa17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Rbm15bQ6PHZ5 887 aaKnown RBP17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Rexo1Q7TT28 1213 aa17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Dpp8Q80YA7 892 aa17.08■□□□□ 0.32
Usp38-201ENSMUST00000042724 Stoml1Q8CI66 399 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms