RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm12169F2Z474 250 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 SriQ6P069 198 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Dusp14Q9JLY7 198 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Dmbt1Q60997 2085 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Hspg2Q05793 3707 aaKnown RBP6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Trbv30A0A0B4J1P1 111 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm7075D3Z497 112 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Vamp3P63024 103 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Vsig8Q6P3A4 417 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ube2tQ9CQ37 204 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Vps25Q9CQ80 176 aa6.5□□□□□ -1.37
Trim39-201ENSMUST00000042717 Itgb1bp1O35671 200 aa6.49□□□□□ -1.37
Trim39-201ENSMUST00000042717 Shisal1Q0VBP7 198 aa6.49□□□□□ -1.37
Trim39-201ENSMUST00000042717 Wfdc2Q9DAU7 174 aa6.49□□□□□ -1.37
Trim39-201ENSMUST00000042717 P01793 123 aa6.49□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ube2cQ9D1C1 179 aa6.49□□□□□ -1.37
Trim39-201ENSMUST00000042717 Rnf212F6TQD1 307 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Vmn1r158G3UY92 307 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm21874J3QNZ6 232 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm933J3QPC1 141 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Mmp23O88676 391 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Psmb8P28063 276 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 A930003A15RikQ3U552 87 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Fa2hQ5MPP0 372 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr312Q7TRZ9 308 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 PerpQ9JK95 193 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 PolqQ8CGS6 2544 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ighv5-9-1A0A0A6YVS4 126 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 LhbO09108 141 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ly6c2P0CW03 131 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr311Q5NC59 308 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Megf9Q8BH27 600 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gpr82Q8BZR0 328 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Trav19A0A0B4J1K4 119 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Trav3n-3A0A0G2JEM0 114 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm45213A0A0U1RNZ6 101 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Tcf21O35437 179 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Sub1P11031 127 aaKnown RBP6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Runx1Q03347 451 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm10300Q8C8P7 189 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr1431Q8VF59 312 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr365Q8VFT2 312 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr983Q8VG90 315 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Psmg3Q9CZH3 122 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Tctex1d1Q9D5I4 173 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Q9DAB9 146 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Cml3Q9JIY8 226 aa6.48□□□□□ -1.37
Trim39-201ENSMUST00000042717 Col6a5A6H584 2640 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Gm6040Q4QY32 63 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Olfr1195Q8VG21 308 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Ifitm2Q99J93 144 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 LbhQ9CX60 105 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Tenm1Q9WTS4 2731 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Arl14eplQ3UKZ7 152 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Isg15Q64339 161 aaKnown RBP6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 A830031A19RikQ8BNT5 113 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Zmat4Q8BZ94 229 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Krtap26-1Q9D7N2 215 aa6.47□□□□□ -1.37
Trim39-201ENSMUST00000042717 Zfp930A0A1D5RM15 441 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 P01747 120 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 Cd69P37217 199 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 Klk7Q91VE3 249 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 SmagpQ99KC7 97 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 Mrpl20Q9CQL4 149 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 Borcs7Q9CRC6 105 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 Urm1Q9D2P4 101 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 HampQ9EQ21 83 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 Nbeal2Q6ZQA0 2742 aa6.46□□□□□ -1.37
Trim39-201ENSMUST00000042717 Trav14d-1A0A075B6B1 121 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Vmn1r119E9Q4H3 307 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm4133K9J7G6 307 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 P06330 118 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Hspe1Q64433 102 aaKnown RBP6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Slc16a4Q8R0M8 500 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Fam103a1Q9CQY2 119 aaKnown RBP6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Plekhb2Q9QZC7 221 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Scgb2a2J3KMP9 96 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Odf3Q920N1 254 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Synj2bpQ9D6K5 145 aa6.46□□□□□ -1.38
Trim39-201ENSMUST00000042717 Trav12d-3A0A075B6A4 115 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ighv1-62-2A0A0A6YXZ4 119 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 S100a4P07091 101 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Pmp2P24526 132 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Rps20P60867 119 aaKnown RBP6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Khdc1aQ3UWR2 166 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Olfr761Q7TRJ0 323 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Spag11Q8K4N2 71 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ndufb4Q9CQC7 129 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 4930470P17RikQ9D542 155 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Rpl35aO55142 110 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Cd24P24807 76 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 MycbQ6P8Z1 170 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gphb5Q812B2 130 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm11733Q8BQP1 125 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Vmn1r216Q8R257 298 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ceacam11Q9D0Z8 303 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Tmem160Q9D938 188 aa6.45□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ighv9-1A0A0B4J1P3 117 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm12888Q3UW77 119 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ube2v1Q9CZY3 147 aa6.44□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms