RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
DKC1-213ENST00000620277 MT1LQ93083 61 aa5.46□□□□□ -1.54
DKC1-213ENST00000620277 MT1EP04732 61 aa5.42□□□□□ -1.54
DKC1-213ENST00000620277 MT1GP13640 62 aa5.38□□□□□ -1.55
DKC1-213ENST00000620277 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
DKC1-213ENST00000620277 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
DKC1-213ENST00000620277 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
DKC1-213ENST00000620277 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
DKC1-213ENST00000620277 LCE2DQ5TA82 110 aaPredicted RBP5.2□□□□□ -1.58
DKC1-213ENST00000620277 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
DKC1-213ENST00000620277 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
DKC1-213ENST00000620277 MT1MQ8N339 61 aa5.09□□□□□ -1.6
DKC1-213ENST00000620277 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
DKC1-213ENST00000620277 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
DKC1-213ENST00000620277 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
DKC1-213ENST00000620277 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
DKC1-213ENST00000620277 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
DKC1-213ENST00000620277 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
DKC1-213ENST00000620277 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
DKC1-213ENST00000620277 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
DKC1-213ENST00000620277 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
DKC1-213ENST00000620277 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
DKC1-213ENST00000620277 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
DKC1-213ENST00000620277 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
DKC1-213ENST00000620277 PRM1P04553 51 aa4.53□□□□□ -1.68
DKC1-213ENST00000620277 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
DKC1-213ENST00000620277 SPRR2EP22531 72 aa4.49□□□□□ -1.69
DKC1-213ENST00000620277 SPRR2BP35325 72 aa4.49□□□□□ -1.69
DKC1-213ENST00000620277 SPRR2AP35326 72 aa4.49□□□□□ -1.69
DKC1-213ENST00000620277 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
DKC1-213ENST00000620277 MT1AP04731 61 aa4.47□□□□□ -1.69
DKC1-213ENST00000620277 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
DKC1-213ENST00000620277 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
DKC1-213ENST00000620277 SPRR2DP22532 72 aa4.26□□□□□ -1.73
DKC1-213ENST00000620277 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
DKC1-213ENST00000620277 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
DKC1-213ENST00000620277 MT3P25713 68 aa4.07□□□□□ -1.76
DKC1-213ENST00000620277 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
DKC1-213ENST00000620277 MT4P47944 62 aa4.01□□□□□ -1.77
DKC1-213ENST00000620277 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.77
DKC1-213ENST00000620277 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
DKC1-213ENST00000620277 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
DKC1-213ENST00000620277 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
DKC1-213ENST00000620277 NEBP20929 6669 aa3.81□□□□□ -1.8
DKC1-213ENST00000620277 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
DKC1-213ENST00000620277 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
DKC1-213ENST00000620277 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
DKC1-213ENST00000620277 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
DKC1-213ENST00000620277 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
DKC1-213ENST00000620277 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
DKC1-213ENST00000620277 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
DKC1-213ENST00000620277 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
DKC1-213ENST00000620277 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
DKC1-213ENST00000620277 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
DKC1-213ENST00000620277 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
DKC1-213ENST00000620277 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
DKC1-213ENST00000620277 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
DKC1-213ENST00000620277 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
DKC1-213ENST00000620277 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
DKC1-213ENST00000620277 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
DKC1-213ENST00000620277 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
DKC1-213ENST00000620277 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
DKC1-213ENST00000620277 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
DKC1-213ENST00000620277 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
DKC1-213ENST00000620277 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
DKC1-213ENST00000620277 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
DKC1-213ENST00000620277 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
DKC1-213ENST00000620277 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
DKC1-213ENST00000620277 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
DKC1-213ENST00000620277 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
DKC1-213ENST00000620277 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
DKC1-213ENST00000620277 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
DKC1-213ENST00000620277 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
DKC1-213ENST00000620277 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
DKC1-213ENST00000620277 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
DKC1-213ENST00000620277 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
DKC1-213ENST00000620277 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 85.5 ms