RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 LINC01590Q5TEZ4 76 aa0.44□□□□□ -2.34
SCAMP1-205ENST00000614488 ARHGAP5-AS1Q96IT6 56 aa0.44□□□□□ -2.34
SCAMP1-205ENST00000614488 MUC17Q685J3 4493 aa0.44□□□□□ -2.34
SCAMP1-205ENST00000614488 LINC01546A6NGU7 62 aa0.43□□□□□ -2.34
SCAMP1-205ENST00000614488 H3BUX3 64 aa0.43□□□□□ -2.34
SCAMP1-205ENST00000614488 WT1-ASQ06250 92 aa0.43□□□□□ -2.34
SCAMP1-205ENST00000614488 DEFB135Q30KP9 77 aa0.43□□□□□ -2.34
SCAMP1-205ENST00000614488 DSTQ03001 7570 aaKnown RBP0.42□□□□□ -2.34
SCAMP1-205ENST00000614488 M0R2T5 61 aa0.42□□□□□ -2.34
SCAMP1-205ENST00000614488 PRM1P04553 51 aa0.42□□□□□ -2.34
SCAMP1-205ENST00000614488 PRCDQ00LT1 54 aa0.42□□□□□ -2.34
SCAMP1-205ENST00000614488 KRTAP19-2Q3LHN2 52 aa0.42□□□□□ -2.34
SCAMP1-205ENST00000614488 TTTY10Q9BZA0 68 aa0.42□□□□□ -2.34
SCAMP1-205ENST00000614488 S4R3F8 94 aa0.42□□□□□ -2.34
SCAMP1-205ENST00000614488 H3BNG1 76 aa0.41□□□□□ -2.34
SCAMP1-205ENST00000614488 H3BSH0 61 aa0.41□□□□□ -2.34
SCAMP1-205ENST00000614488 MT1HP80294 61 aa0.41□□□□□ -2.34
SCAMP1-205ENST00000614488 TMEM167AQ8TBQ9 72 aa0.41□□□□□ -2.34
SCAMP1-205ENST00000614488 SMIM2Q9BVW6 85 aa0.41□□□□□ -2.34
SCAMP1-205ENST00000614488 H3BUA1 57 aa0.4□□□□□ -2.35
SCAMP1-205ENST00000614488 K7EIM0 57 aa0.4□□□□□ -2.35
SCAMP1-205ENST00000614488 NDUFA1O15239 70 aa0.4□□□□□ -2.35
SCAMP1-205ENST00000614488 SMR3BP02814 79 aaPredicted RBP0.4□□□□□ -2.35
SCAMP1-205ENST00000614488 POLR2KP53803 58 aaKnown RBP0.4□□□□□ -2.35
SCAMP1-205ENST00000614488 PRLHP81277 87 aa0.4□□□□□ -2.35
SCAMP1-205ENST00000614488 RPL39P5Q59GN2 51 aa0.39□□□□□ -2.35
SCAMP1-205ENST00000614488 FLGP20930 4061 aaPredicted RBP0.39□□□□□ -2.35
SCAMP1-205ENST00000614488 M0QY20 66 aa0.38□□□□□ -2.35
SCAMP1-205ENST00000614488 RPL39P62891 51 aaKnown RBP0.38□□□□□ -2.35
SCAMP1-205ENST00000614488 DEFB136Q30KP8 78 aa0.38□□□□□ -2.35
SCAMP1-205ENST00000614488 IGLV5-48A0A075B6I7 105 aa0.37□□□□□ -2.35
SCAMP1-205ENST00000614488 SPART-AS1P0CW21 52 aa0.37□□□□□ -2.35
SCAMP1-205ENST00000614488 DEFB131AP59861 70 aa0.37□□□□□ -2.35
SCAMP1-205ENST00000614488 WFDC10BQ8IUB3 73 aa0.37□□□□□ -2.35
SCAMP1-205ENST00000614488 RPL39LQ96EH5 51 aaKnown RBP0.37□□□□□ -2.35
SCAMP1-205ENST00000614488 RHPN1-AS1Q9BWJ2 59 aa0.37□□□□□ -2.35
SCAMP1-205ENST00000614488 A8MTW9 85 aa0.36□□□□□ -2.35
SCAMP1-205ENST00000614488 APELAP0DMC3 54 aa0.36□□□□□ -2.35
SCAMP1-205ENST00000614488 LEAP2Q969E1 77 aa0.36□□□□□ -2.35
SCAMP1-205ENST00000614488 TOMM7Q9P0U1 55 aa0.36□□□□□ -2.35
SCAMP1-205ENST00000614488 HTN1P15515 57 aa0.35□□□□□ -2.35
SCAMP1-205ENST00000614488 LINC01556Q5JQF7 62 aa0.35□□□□□ -2.35
SCAMP1-205ENST00000614488 MT2AP02795 61 aa0.34□□□□□ -2.36
SCAMP1-205ENST00000614488 SPRR2EP22531 72 aa0.34□□□□□ -2.36
SCAMP1-205ENST00000614488 SPRR2BP35325 72 aa0.34□□□□□ -2.36
SCAMP1-205ENST00000614488 SPRR2AP35326 72 aa0.34□□□□□ -2.36
SCAMP1-205ENST00000614488 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
SCAMP1-205ENST00000614488 NOP10Q9NPE3 64 aaKnown RBP0.34□□□□□ -2.36
SCAMP1-205ENST00000614488 A0A096LPF7 62 aa0.33□□□□□ -2.36
SCAMP1-205ENST00000614488 DEFB4AO15263 64 aa0.33□□□□□ -2.36
SCAMP1-205ENST00000614488 MT1FP04733 61 aa0.33□□□□□ -2.36
SCAMP1-205ENST00000614488 SPRR2DP22532 72 aa0.33□□□□□ -2.36
SCAMP1-205ENST00000614488 RPS29P62273 56 aaKnown RBP0.33□□□□□ -2.36
SCAMP1-205ENST00000614488 CLPSL2Q6UWE3 100 aa0.33□□□□□ -2.36
SCAMP1-205ENST00000614488 MMP24-AS1A0A0U1RRL7 71 aa0.32□□□□□ -2.36
SCAMP1-205ENST00000614488 DEFB1P60022 68 aa0.32□□□□□ -2.36
SCAMP1-205ENST00000614488 M0QZ58 72 aa0.31□□□□□ -2.36
SCAMP1-205ENST00000614488 SPRR2FQ96RM1 72 aa0.31□□□□□ -2.36
SCAMP1-205ENST00000614488 A0A096LNI7 61 aa0.3□□□□□ -2.36
SCAMP1-205ENST00000614488 C9orf92A6NGG3 77 aa0.29□□□□□ -2.36
SCAMP1-205ENST00000614488 HTN3P15516 51 aa0.29□□□□□ -2.36
SCAMP1-205ENST00000614488 KRTAP19-8Q3LI54 63 aa0.29□□□□□ -2.36
SCAMP1-205ENST00000614488 MT1BP07438 61 aa0.28□□□□□ -2.36
SCAMP1-205ENST00000614488 KRTAP20-2Q3LI61 65 aa0.28□□□□□ -2.36
SCAMP1-205ENST00000614488 KRTAP8-1Q8IUC2 63 aa0.28□□□□□ -2.36
SCAMP1-205ENST00000614488 SPRR2GQ9BYE4 73 aa0.28□□□□□ -2.36
SCAMP1-205ENST00000614488 TNP1P09430 55 aa0.27□□□□□ -2.37
SCAMP1-205ENST00000614488 MT4P47944 62 aa0.27□□□□□ -2.37
SCAMP1-205ENST00000614488 MT1GP13640 62 aa0.25□□□□□ -2.37
SCAMP1-205ENST00000614488 MT1XP80297 61 aa0.23□□□□□ -2.37
SCAMP1-205ENST00000614488 KRTAP6-2Q3LI66 62 aa0.22□□□□□ -2.37
SCAMP1-205ENST00000614488 KRTAP19-7Q3SYF9 63 aa0.22□□□□□ -2.37
SCAMP1-205ENST00000614488 MT1MQ8N339 61 aa0.22□□□□□ -2.37
SCAMP1-205ENST00000614488 MT1EP04732 61 aa0.21□□□□□ -2.38
SCAMP1-205ENST00000614488 MT1AP04731 61 aa0.19□□□□□ -2.38
SCAMP1-205ENST00000614488 MT1LQ93083 61 aa0.18□□□□□ -2.38
SCAMP1-205ENST00000614488 KRTAP19-5Q3LI72 72 aa0.17□□□□□ -2.38
SCAMP1-205ENST00000614488 KRTAP6-1Q3LI64 71 aa0.14□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 95.7 ms