RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
TARDBP-212ENST00000611008 SMR3BP02814 79 aaPredicted RBP1.02□□□□□ -2.25
TARDBP-212ENST00000611008 KRTAP2-3P0C7H8 128 aa1.02□□□□□ -2.25
TARDBP-212ENST00000611008 DEFB131AP59861 70 aa1.02□□□□□ -2.25
TARDBP-212ENST00000611008 KRTAP2-4Q9BYR9 128 aa1.02□□□□□ -2.25
TARDBP-212ENST00000611008 H3BUX3 64 aa1.01□□□□□ -2.25
TARDBP-212ENST00000611008 SPRR1BP22528 89 aa1.01□□□□□ -2.25
TARDBP-212ENST00000611008 KLK9Q2XQG4 91 aa1.01□□□□□ -2.25
TARDBP-212ENST00000611008 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
TARDBP-212ENST00000611008 M0QY20 66 aa1□□□□□ -2.25
TARDBP-212ENST00000611008 PRLHP81277 87 aa1□□□□□ -2.25
TARDBP-212ENST00000611008 H3BUA1 57 aa0.99□□□□□ -2.25
TARDBP-212ENST00000611008 TOMM7Q9P0U1 55 aa0.99□□□□□ -2.25
TARDBP-212ENST00000611008 A8MTW9 85 aa0.98□□□□□ -2.25
TARDBP-212ENST00000611008 CLPSL2Q6UWE3 100 aa0.97□□□□□ -2.25
TARDBP-212ENST00000611008 KRTAP2-1Q9BYU5 128 aa0.97□□□□□ -2.25
TARDBP-212ENST00000611008 S4R3F8 94 aa0.97□□□□□ -2.25
TARDBP-212ENST00000611008 FLGP20930 4061 aaPredicted RBP0.97□□□□□ -2.25
TARDBP-212ENST00000611008 DEFB136Q30KP8 78 aa0.96□□□□□ -2.26
TARDBP-212ENST00000611008 TMEM167AQ8TBQ9 72 aa0.95□□□□□ -2.26
TARDBP-212ENST00000611008 SPINK1P00995 79 aa0.94□□□□□ -2.26
TARDBP-212ENST00000611008 AHNAKQ09666 5890 aaKnown RBP0.93□□□□□ -2.26
TARDBP-212ENST00000611008 DSTQ03001 7570 aaKnown RBP0.93□□□□□ -2.26
TARDBP-212ENST00000611008 A0A0D9SG42 100 aa0.93□□□□□ -2.26
TARDBP-212ENST00000611008 K7EIM0 57 aa0.92□□□□□ -2.26
TARDBP-212ENST00000611008 MT1HP80294 61 aa0.92□□□□□ -2.26
TARDBP-212ENST00000611008 DEFB135Q30KP9 77 aa0.92□□□□□ -2.26
TARDBP-212ENST00000611008 KRTAP19-6Q3LI70 58 aa0.92□□□□□ -2.26
TARDBP-212ENST00000611008 RPL39P5Q59GN2 51 aa0.92□□□□□ -2.26
TARDBP-212ENST00000611008 NOP10Q9NPE3 64 aaKnown RBP0.91□□□□□ -2.26
TARDBP-212ENST00000611008 MUC5BQ9HC84 5762 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-212ENST00000611008 KRTAP19-2Q3LHN2 52 aa0.9□□□□□ -2.27
TARDBP-212ENST00000611008 DEFB4AO15263 64 aa0.86□□□□□ -2.27
TARDBP-212ENST00000611008 SPART-AS1P0CW21 52 aa0.84□□□□□ -2.27
TARDBP-212ENST00000611008 MUC5ACP98088 5654 aa0.84□□□□□ -2.28
TARDBP-212ENST00000611008 SPINK6Q6UWN8 80 aa0.83□□□□□ -2.28
TARDBP-212ENST00000611008 H3BNG1 76 aa0.82□□□□□ -2.28
TARDBP-212ENST00000611008 M0R2T5 61 aa0.82□□□□□ -2.28
TARDBP-212ENST00000611008 APELAP0DMC3 54 aa0.82□□□□□ -2.28
TARDBP-212ENST00000611008 SPRR2EP22531 72 aa0.81□□□□□ -2.28
TARDBP-212ENST00000611008 SPRR2BP35325 72 aa0.81□□□□□ -2.28
TARDBP-212ENST00000611008 SPRR2AP35326 72 aa0.81□□□□□ -2.28
TARDBP-212ENST00000611008 M0QZ58 72 aa0.8□□□□□ -2.28
TARDBP-212ENST00000611008 SPRR2DP22532 72 aa0.79□□□□□ -2.28
TARDBP-212ENST00000611008 DEFB1P60022 68 aa0.79□□□□□ -2.28
TARDBP-212ENST00000611008 HTN3P15516 51 aa0.78□□□□□ -2.28
TARDBP-212ENST00000611008 MT2AP02795 61 aa0.77□□□□□ -2.29
TARDBP-212ENST00000611008 A0A096LPF7 62 aa0.76□□□□□ -2.29
TARDBP-212ENST00000611008 MT1FP04733 61 aa0.76□□□□□ -2.29
TARDBP-212ENST00000611008 HTN1P15515 57 aa0.75□□□□□ -2.29
TARDBP-212ENST00000611008 LINC01556Q5JQF7 62 aa0.75□□□□□ -2.29
TARDBP-212ENST00000611008 SPRR2FQ96RM1 72 aa0.75□□□□□ -2.29
TARDBP-212ENST00000611008 RHPN1-AS1Q9BWJ2 59 aa0.74□□□□□ -2.29
TARDBP-212ENST00000611008 A0A096LNI7 61 aa0.73□□□□□ -2.29
TARDBP-212ENST00000611008 TNP1P09430 55 aa0.73□□□□□ -2.29
TARDBP-212ENST00000611008 C9orf92A6NGG3 77 aa0.69□□□□□ -2.3
TARDBP-212ENST00000611008 MT4P47944 62 aa0.68□□□□□ -2.3
TARDBP-212ENST00000611008 PRM1P04553 51 aa0.66□□□□□ -2.3
TARDBP-212ENST00000611008 KRTAP8-1Q8IUC2 63 aa0.65□□□□□ -2.31
TARDBP-212ENST00000611008 MT1BP07438 61 aa0.63□□□□□ -2.31
TARDBP-212ENST00000611008 RPS29P62273 56 aaKnown RBP0.63□□□□□ -2.31
TARDBP-212ENST00000611008 SYNE1Q8NF91 8797 aaKnown RBP0.63□□□□□ -2.31
TARDBP-212ENST00000611008 KRTAP20-2Q3LI61 65 aa0.62□□□□□ -2.31
TARDBP-212ENST00000611008 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
TARDBP-212ENST00000611008 KRTAP19-8Q3LI54 63 aa0.61□□□□□ -2.31
TARDBP-212ENST00000611008 SPRR2GQ9BYE4 73 aa0.56□□□□□ -2.32
TARDBP-212ENST00000611008 MT1XP80297 61 aa0.52□□□□□ -2.33
TARDBP-212ENST00000611008 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
TARDBP-212ENST00000611008 MT1AP04731 61 aa0.51□□□□□ -2.33
TARDBP-212ENST00000611008 MT1GP13640 62 aa0.51□□□□□ -2.33
TARDBP-212ENST00000611008 KRTAP19-5Q3LI72 72 aa0.51□□□□□ -2.33
TARDBP-212ENST00000611008 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
TARDBP-212ENST00000611008 KRTAP6-2Q3LI66 62 aa0.5□□□□□ -2.33
TARDBP-212ENST00000611008 MT1EP04732 61 aa0.48□□□□□ -2.33
TARDBP-212ENST00000611008 KRTAP19-7Q3SYF9 63 aa0.47□□□□□ -2.33
TARDBP-212ENST00000611008 MT1MQ8N339 61 aa0.47□□□□□ -2.33
TARDBP-212ENST00000611008 MT1LQ93083 61 aa0.4□□□□□ -2.35
TARDBP-212ENST00000611008 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 130.6 ms