RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 H3BSH0 61 aa0.79□□□□□ -2.28
FOXN3-217ENST00000557572 M0R2T5 61 aa0.79□□□□□ -2.28
FOXN3-217ENST00000557572 PRLHP81277 87 aa0.79□□□□□ -2.28
FOXN3-217ENST00000557572 COX14Q96I36 57 aa0.79□□□□□ -2.28
FOXN3-217ENST00000557572 MMP24-AS1A0A0U1RRL7 71 aa0.77□□□□□ -2.29
FOXN3-217ENST00000557572 MUC17Q685J3 4493 aa0.77□□□□□ -2.29
FOXN3-217ENST00000557572 H3BUX3 64 aa0.76□□□□□ -2.29
FOXN3-217ENST00000557572 SPINK6Q6UWN8 80 aa0.76□□□□□ -2.29
FOXN3-217ENST00000557572 DNAH8Q96JB1 4490 aa0.76□□□□□ -2.29
FOXN3-217ENST00000557572 IGLV5-48A0A075B6I7 105 aa0.75□□□□□ -2.29
FOXN3-217ENST00000557572 H3BUA1 57 aa0.75□□□□□ -2.29
FOXN3-217ENST00000557572 H0YGG7 62 aa0.74□□□□□ -2.29
FOXN3-217ENST00000557572 SPRR2EP22531 72 aa0.74□□□□□ -2.29
FOXN3-217ENST00000557572 SPRR2BP35325 72 aa0.74□□□□□ -2.29
FOXN3-217ENST00000557572 SPRR2AP35326 72 aa0.74□□□□□ -2.29
FOXN3-217ENST00000557572 KRTAP19-6Q3LI70 58 aa0.74□□□□□ -2.29
FOXN3-217ENST00000557572 MT1HP80294 61 aa0.73□□□□□ -2.29
FOXN3-217ENST00000557572 FLGP20930 4061 aaPredicted RBP0.73□□□□□ -2.29
FOXN3-217ENST00000557572 SPRR2DP22532 72 aa0.72□□□□□ -2.29
FOXN3-217ENST00000557572 DEFB136Q30KP8 78 aa0.72□□□□□ -2.29
FOXN3-217ENST00000557572 DEFB135Q30KP9 77 aa0.72□□□□□ -2.29
FOXN3-217ENST00000557572 PRM1P04553 51 aa0.7□□□□□ -2.3
FOXN3-217ENST00000557572 DEFB131AP59861 70 aa0.7□□□□□ -2.3
FOXN3-217ENST00000557572 DEFB4AO15263 64 aa0.68□□□□□ -2.3
FOXN3-217ENST00000557572 SPINK1P00995 79 aa0.68□□□□□ -2.3
FOXN3-217ENST00000557572 RPL39P62891 51 aaKnown RBP0.67□□□□□ -2.3
FOXN3-217ENST00000557572 SPRR2FQ96RM1 72 aa0.67□□□□□ -2.3
FOXN3-217ENST00000557572 POLR2KP53803 58 aaKnown RBP0.66□□□□□ -2.3
FOXN3-217ENST00000557572 MT4P47944 62 aa0.65□□□□□ -2.31
FOXN3-217ENST00000557572 NOP10Q9NPE3 64 aaKnown RBP0.65□□□□□ -2.31
FOXN3-217ENST00000557572 HTN3P15516 51 aa0.64□□□□□ -2.31
FOXN3-217ENST00000557572 RPL39LQ96EH5 51 aaKnown RBP0.64□□□□□ -2.31
FOXN3-217ENST00000557572 SPART-AS1P0CW21 52 aa0.63□□□□□ -2.31
FOXN3-217ENST00000557572 CLPSL2Q6UWE3 100 aa0.63□□□□□ -2.31
FOXN3-217ENST00000557572 KRTAP19-2Q3LHN2 52 aa0.62□□□□□ -2.31
FOXN3-217ENST00000557572 M0QY20 66 aa0.61□□□□□ -2.31
FOXN3-217ENST00000557572 LEAP2Q969E1 77 aa0.6□□□□□ -2.31
FOXN3-217ENST00000557572 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.31
FOXN3-217ENST00000557572 A8MTW9 85 aa0.59□□□□□ -2.31
FOXN3-217ENST00000557572 MT2AP02795 61 aa0.59□□□□□ -2.31
FOXN3-217ENST00000557572 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
FOXN3-217ENST00000557572 ARHGAP5-AS1Q96IT6 56 aa0.58□□□□□ -2.32
FOXN3-217ENST00000557572 MT1FP04733 61 aa0.57□□□□□ -2.32
FOXN3-217ENST00000557572 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
FOXN3-217ENST00000557572 H3BNG1 76 aa0.54□□□□□ -2.32
FOXN3-217ENST00000557572 C9orf92A6NGG3 77 aa0.52□□□□□ -2.33
FOXN3-217ENST00000557572 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
FOXN3-217ENST00000557572 M0QZ58 72 aa0.52□□□□□ -2.33
FOXN3-217ENST00000557572 TTTY10Q9BZA0 68 aa0.52□□□□□ -2.33
FOXN3-217ENST00000557572 APELAP0DMC3 54 aa0.51□□□□□ -2.33
FOXN3-217ENST00000557572 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
FOXN3-217ENST00000557572 TOMM7Q9P0U1 55 aa0.51□□□□□ -2.33
FOXN3-217ENST00000557572 A0A096LPF7 62 aa0.5□□□□□ -2.33
FOXN3-217ENST00000557572 TNP1P09430 55 aa0.49□□□□□ -2.33
FOXN3-217ENST00000557572 LINC01556Q5JQF7 62 aa0.49□□□□□ -2.33
FOXN3-217ENST00000557572 RHPN1-AS1Q9BWJ2 59 aa0.47□□□□□ -2.33
FOXN3-217ENST00000557572 HTN1P15515 57 aa0.45□□□□□ -2.34
FOXN3-217ENST00000557572 LINC01590Q5TEZ4 76 aa0.45□□□□□ -2.34
FOXN3-217ENST00000557572 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
FOXN3-217ENST00000557572 TMEM167AQ8TBQ9 72 aa0.44□□□□□ -2.34
FOXN3-217ENST00000557572 MT1BP07438 61 aa0.42□□□□□ -2.34
FOXN3-217ENST00000557572 A0A096LNI7 61 aa0.41□□□□□ -2.34
FOXN3-217ENST00000557572 PRCDQ00LT1 54 aa0.41□□□□□ -2.34
FOXN3-217ENST00000557572 RPS29P62273 56 aaKnown RBP0.4□□□□□ -2.35
FOXN3-217ENST00000557572 KRTAP19-8Q3LI54 63 aa0.39□□□□□ -2.35
FOXN3-217ENST00000557572 MT1GP13640 62 aa0.38□□□□□ -2.35
FOXN3-217ENST00000557572 MT1AP04731 61 aa0.37□□□□□ -2.35
FOXN3-217ENST00000557572 DEFB1P60022 68 aa0.37□□□□□ -2.35
FOXN3-217ENST00000557572 RPL39P5Q59GN2 51 aa0.36□□□□□ -2.35
FOXN3-217ENST00000557572 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
FOXN3-217ENST00000557572 KRTAP19-5Q3LI72 72 aa0.34□□□□□ -2.36
FOXN3-217ENST00000557572 K7EIM0 57 aa0.33□□□□□ -2.36
FOXN3-217ENST00000557572 MT1XP80297 61 aa0.33□□□□□ -2.36
FOXN3-217ENST00000557572 MT1MQ8N339 61 aa0.32□□□□□ -2.36
FOXN3-217ENST00000557572 MT1EP04732 61 aa0.31□□□□□ -2.36
FOXN3-217ENST00000557572 KRTAP19-7Q3SYF9 63 aa0.29□□□□□ -2.36
FOXN3-217ENST00000557572 MT1LQ93083 61 aa0.24□□□□□ -2.37
FOXN3-217ENST00000557572 KRTAP6-1Q3LI64 71 aa0.22□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms