RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 C9orf92A6NGG3 77 aa2.18□□□□□ -2.06
NPAS3-204ENST00000546849 H1FX-AS1Q4G0G2 97 aa2.18□□□□□ -2.06
NPAS3-204ENST00000546849 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
NPAS3-204ENST00000546849 SMR3BP02814 79 aaPredicted RBP2.17□□□□□ -2.06
NPAS3-204ENST00000546849 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
NPAS3-204ENST00000546849 TNXBP22105 4242 aa2.17□□□□□ -2.06
NPAS3-204ENST00000546849 RPL37P61927 97 aaKnown RBP2.16□□□□□ -2.06
NPAS3-204ENST00000546849 S4R3F8 94 aa2.15□□□□□ -2.07
NPAS3-204ENST00000546849 SSPOA2VEC9 5147 aa2.14□□□□□ -2.07
NPAS3-204ENST00000546849 Q5VSD8 79 aa2.14□□□□□ -2.07
NPAS3-204ENST00000546849 M0QZ58 72 aa2.12□□□□□ -2.07
NPAS3-204ENST00000546849 CRIPTQ9P021 101 aa2.12□□□□□ -2.07
NPAS3-204ENST00000546849 H0YAA0 97 aa2.08□□□□□ -2.08
NPAS3-204ENST00000546849 KRTAP10-4P60372 401 aaPredicted RBP2.08□□□□□ -2.08
NPAS3-204ENST00000546849 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
NPAS3-204ENST00000546849 DNAH8Q96JB1 4490 aa2.04□□□□□ -2.08
NPAS3-204ENST00000546849 LPAP08519 4548 aa2.04□□□□□ -2.08
NPAS3-204ENST00000546849 NEBP20929 6669 aa2.04□□□□□ -2.08
NPAS3-204ENST00000546849 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.08
NPAS3-204ENST00000546849 A0A0D9SG42 100 aa2.01□□□□□ -2.09
NPAS3-204ENST00000546849 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
NPAS3-204ENST00000546849 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
NPAS3-204ENST00000546849 USH2AO75445 5202 aa1.98□□□□□ -2.09
NPAS3-204ENST00000546849 FCGBPQ9Y6R7 5405 aaPredicted RBP1.97□□□□□ -2.09
NPAS3-204ENST00000546849 MT1HL1P0DM35 61 aa1.96□□□□□ -2.1
NPAS3-204ENST00000546849 KRTAP4-1Q9BYQ7 146 aa1.95□□□□□ -2.1
NPAS3-204ENST00000546849 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
NPAS3-204ENST00000546849 TNP1P09430 55 aa1.9□□□□□ -2.11
NPAS3-204ENST00000546849 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
NPAS3-204ENST00000546849 KMT2DO14686 5537 aa1.87□□□□□ -2.11
NPAS3-204ENST00000546849 MUC17Q685J3 4493 aa1.85□□□□□ -2.11
NPAS3-204ENST00000546849 M0R2T5 61 aa1.84□□□□□ -2.11
NPAS3-204ENST00000546849 C10orf95Q9H7T3 257 aa1.82□□□□□ -2.12
NPAS3-204ENST00000546849 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
NPAS3-204ENST00000546849 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
NPAS3-204ENST00000546849 INE1O15225 51 aa1.78□□□□□ -2.12
NPAS3-204ENST00000546849 SPRR2GQ9BYE4 73 aa1.75□□□□□ -2.13
NPAS3-204ENST00000546849 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
NPAS3-204ENST00000546849 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
NPAS3-204ENST00000546849 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
NPAS3-204ENST00000546849 KRTAP19-2Q3LHN2 52 aa1.69□□□□□ -2.14
NPAS3-204ENST00000546849 FLGP20930 4061 aaPredicted RBP1.67□□□□□ -2.14
NPAS3-204ENST00000546849 MT1HP80294 61 aa1.66□□□□□ -2.14
NPAS3-204ENST00000546849 KRTAP19-8Q3LI54 63 aa1.65□□□□□ -2.15
NPAS3-204ENST00000546849 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
NPAS3-204ENST00000546849 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
NPAS3-204ENST00000546849 KRTAP19-6Q3LI70 58 aa1.62□□□□□ -2.15
NPAS3-204ENST00000546849 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
NPAS3-204ENST00000546849 MT2AP02795 61 aa1.61□□□□□ -2.15
NPAS3-204ENST00000546849 MT1FP04733 61 aa1.58□□□□□ -2.16
NPAS3-204ENST00000546849 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
NPAS3-204ENST00000546849 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
NPAS3-204ENST00000546849 MT1XP80297 61 aa1.54□□□□□ -2.16
NPAS3-204ENST00000546849 MT1BP07438 61 aa1.53□□□□□ -2.16
NPAS3-204ENST00000546849 SPRR2EP22531 72 aa1.49□□□□□ -2.17
NPAS3-204ENST00000546849 SPRR2BP35325 72 aa1.49□□□□□ -2.17
NPAS3-204ENST00000546849 SPRR2AP35326 72 aa1.49□□□□□ -2.17
NPAS3-204ENST00000546849 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
NPAS3-204ENST00000546849 SPRR2DP22532 72 aa1.45□□□□□ -2.18
NPAS3-204ENST00000546849 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
NPAS3-204ENST00000546849 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
NPAS3-204ENST00000546849 MT1EP04732 61 aa1.39□□□□□ -2.19
NPAS3-204ENST00000546849 MT1LQ93083 61 aa1.39□□□□□ -2.19
NPAS3-204ENST00000546849 MT1GP13640 62 aa1.38□□□□□ -2.19
NPAS3-204ENST00000546849 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
NPAS3-204ENST00000546849 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
NPAS3-204ENST00000546849 KRTAP19-3Q7Z4W3 81 aa1.33□□□□□ -2.2
NPAS3-204ENST00000546849 MT4P47944 62 aa1.3□□□□□ -2.2
NPAS3-204ENST00000546849 MT1MQ8N339 61 aa1.28□□□□□ -2.2
NPAS3-204ENST00000546849 MT1AP04731 61 aa1.25□□□□□ -2.21
NPAS3-204ENST00000546849 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
NPAS3-204ENST00000546849 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
NPAS3-204ENST00000546849 KRTAP20-2Q3LI61 65 aa1.12□□□□□ -2.23
NPAS3-204ENST00000546849 KRTAP6-1Q3LI64 71 aa1.1□□□□□ -2.23
NPAS3-204ENST00000546849 PRM1P04553 51 aa1.05□□□□□ -2.24
NPAS3-204ENST00000546849 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
NPAS3-204ENST00000546849 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
NPAS3-204ENST00000546849 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms