RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 SERP1Q9Y6X1 66 aa-0.16□□□□□ -2.44
YBX3-214ENST00000544501 LINC00587B1AMM8 73 aa-0.17□□□□□ -2.44
YBX3-214ENST00000544501 APOC3P02656 99 aa-0.17□□□□□ -2.44
YBX3-214ENST00000544501 IGLC3P0DOY3 106 aa-0.17□□□□□ -2.44
YBX3-214ENST00000544501 MRPL54Q6P161 138 aaKnown RBP-0.17□□□□□ -2.44
YBX3-214ENST00000544501 SNHG12Q9BXW3 62 aa-0.17□□□□□ -2.44
YBX3-214ENST00000544501 UQCR11O14957 56 aa-0.18□□□□□ -2.44
YBX3-214ENST00000544501 ACYP1P07311 99 aa-0.18□□□□□ -2.44
YBX3-214ENST00000544501 S100A16Q96FQ6 103 aaKnown RBP-0.18□□□□□ -2.44
YBX3-214ENST00000544501 MYMXA0A1B0GTQ4 84 aa-0.19□□□□□ -2.44
YBX3-214ENST00000544501 A0A1B0GUT8 65 aa-0.19□□□□□ -2.44
YBX3-214ENST00000544501 GNG11P61952 73 aa-0.19□□□□□ -2.44
YBX3-214ENST00000544501 DEFB107AQ8IZN7 70 aa-0.19□□□□□ -2.44
YBX3-214ENST00000544501 CHKB-CPT1BH3BT56 60 aa-0.2□□□□□ -2.44
YBX3-214ENST00000544501 K7EMI3 77 aa-0.2□□□□□ -2.44
YBX3-214ENST00000544501 S100A8P05109 93 aa-0.2□□□□□ -2.44
YBX3-214ENST00000544501 AKAIN1P0CW23 69 aa-0.2□□□□□ -2.44
YBX3-214ENST00000544501 GNG4P50150 75 aa-0.2□□□□□ -2.44
YBX3-214ENST00000544501 C12orf57Q99622 126 aa-0.2□□□□□ -2.44
YBX3-214ENST00000544501 HIGD1BQ9P298 99 aa-0.2□□□□□ -2.44
YBX3-214ENST00000544501 SMIM31A0A1B0GVY4 71 aa-0.21□□□□□ -2.44
YBX3-214ENST00000544501 LINC01549A6NIU2 74 aa-0.21□□□□□ -2.44
YBX3-214ENST00000544501 H7BZZ5 65 aa-0.21□□□□□ -2.44
YBX3-214ENST00000544501 LINC00308Q8TCZ7 52 aa-0.21□□□□□ -2.44
YBX3-214ENST00000544501 LINC01558Q9Y6Z2 57 aa-0.21□□□□□ -2.44
YBX3-214ENST00000544501 SMIM27A0A1W2PRY6 76 aa-0.22□□□□□ -2.44
YBX3-214ENST00000544501 NAP1L6A6NFF2 107 aa-0.22□□□□□ -2.44
YBX3-214ENST00000544501 FAUP35544 74 aaKnown RBP-0.22□□□□□ -2.44
YBX3-214ENST00000544501 SERF2P84101 59 aa-0.22□□□□□ -2.44
YBX3-214ENST00000544501 C8orf59Q8N0T1 100 aaPredicted RBP-0.22□□□□□ -2.44
YBX3-214ENST00000544501 MANBALQ9NQG1 85 aa-0.22□□□□□ -2.44
YBX3-214ENST00000544501 UQCR10Q9UDW1 63 aa-0.22□□□□□ -2.44
YBX3-214ENST00000544501 SYS1-DBNDD2H3BUS1 97 aa-0.23□□□□□ -2.45
YBX3-214ENST00000544501 BVES-AS1Q5T3Y7 98 aa-0.24□□□□□ -2.45
YBX3-214ENST00000544501 S100ZQ8WXG8 99 aa-0.24□□□□□ -2.45
YBX3-214ENST00000544501 PLNP26678 52 aa-0.25□□□□□ -2.45
YBX3-214ENST00000544501 TOMM5Q8N4H5 51 aa-0.25□□□□□ -2.45
YBX3-214ENST00000544501 GNG13Q9P2W3 67 aa-0.25□□□□□ -2.45
YBX3-214ENST00000544501 MPC2O95563 127 aa-0.26□□□□□ -2.45
YBX3-214ENST00000544501 S100A1P23297 94 aa-0.26□□□□□ -2.45
YBX3-214ENST00000544501 NREPQ16612 68 aa-0.26□□□□□ -2.45
YBX3-214ENST00000544501 SVBPQ8N300 66 aa-0.26□□□□□ -2.45
YBX3-214ENST00000544501 A0A1B0GV90 55 aa-0.27□□□□□ -2.45
YBX3-214ENST00000544501 SMCO4Q9NRQ5 59 aa-0.27□□□□□ -2.45
YBX3-214ENST00000544501 UMAD1C9J7I0 102 aa-0.28□□□□□ -2.45
YBX3-214ENST00000544501 H0YGX0 51 aa-0.28□□□□□ -2.45
YBX3-214ENST00000544501 ATOX1O00244 68 aa-0.28□□□□□ -2.45
YBX3-214ENST00000544501 ATP5EP56381 51 aaPredicted RBP-0.28□□□□□ -2.45
YBX3-214ENST00000544501 PMCHL1Q16048 86 aa-0.28□□□□□ -2.45
YBX3-214ENST00000544501 H0Y9P7 68 aa-0.29□□□□□ -2.46
YBX3-214ENST00000544501 COX6CP09669 75 aa-0.29□□□□□ -2.46
YBX3-214ENST00000544501 COX8AP10176 69 aa-0.29□□□□□ -2.46
YBX3-214ENST00000544501 PRO1854Q9UHT4 67 aa-0.29□□□□□ -2.46
YBX3-214ENST00000544501 A0A1B0GU69 56 aa-0.3□□□□□ -2.46
YBX3-214ENST00000544501 KRTDAPP60985 99 aa-0.3□□□□□ -2.46
YBX3-214ENST00000544501 HSD52Q0P140 79 aa-0.3□□□□□ -2.46
YBX3-214ENST00000544501 ADIRFQ15847 76 aa-0.3□□□□□ -2.46
YBX3-214ENST00000544501 PMCHL2Q9BQD1 86 aa-0.3□□□□□ -2.46
YBX3-214ENST00000544501 DLEU1O43261 78 aa-0.31□□□□□ -2.46
YBX3-214ENST00000544501 C18orf32Q8TCD1 76 aa-0.31□□□□□ -2.46
YBX3-214ENST00000544501 TMEM218A2RU14 115 aa-0.32□□□□□ -2.46
YBX3-214ENST00000544501 LEPROTL1O95214 131 aa-0.32□□□□□ -2.46
YBX3-214ENST00000544501 GTF2H5Q6ZYL4 71 aa-0.32□□□□□ -2.46
YBX3-214ENST00000544501 SERP2Q8N6R1 65 aa-0.32□□□□□ -2.46
YBX3-214ENST00000544501 VAMP8Q9BV40 100 aa-0.32□□□□□ -2.46
YBX3-214ENST00000544501 GNGT1P63211 74 aa-0.33□□□□□ -2.46
YBX3-214ENST00000544501 UBL5Q9BZL1 73 aa-0.34□□□□□ -2.46
YBX3-214ENST00000544501 KANTRA0A1W2PQU2 76 aa-0.35□□□□□ -2.47
YBX3-214ENST00000544501 Q9H521 79 aa-0.37□□□□□ -2.47
YBX3-214ENST00000544501 ATXN8Q156A1 80 aa-0.38□□□□□ -2.47
YBX3-214ENST00000544501 PEA15Q15121 130 aa-0.39□□□□□ -2.47
YBX3-214ENST00000544501 COL5A1-AS1Q5SY13 56 aa-0.42□□□□□ -2.48
YBX3-214ENST00000544501 ETDBQ3ZM63 59 aa-0.43□□□□□ -2.48
YBX3-214ENST00000544501 ATP5EP2Q5VTU8 51 aa-0.43□□□□□ -2.48
YBX3-214ENST00000544501 C14orf144Q96I85 54 aa-0.46□□□□□ -2.48
YBX3-214ENST00000544501 LINC00643Q86TS7 51 aa-0.52□□□□□ -2.49
YBX3-214ENST00000544501 M0R143 59 aa-0.53□□□□□ -2.49
YBX3-214ENST00000544501 PYY3Q5JQD4 70 aa-0.59□□□□□ -2.5
Retrieved 78 of 20,778 RNA–protein pairs in 403.5 ms