RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.69
PCMTD1-208ENST00000544451 MT1LQ93083 61 aa4.45□□□□□ -1.7
PCMTD1-208ENST00000544451 MT1EP04732 61 aa4.41□□□□□ -1.7
PCMTD1-208ENST00000544451 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
PCMTD1-208ENST00000544451 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
PCMTD1-208ENST00000544451 LCE3BQ5TA77 95 aa4.34□□□□□ -1.72
PCMTD1-208ENST00000544451 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
PCMTD1-208ENST00000544451 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
PCMTD1-208ENST00000544451 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
PCMTD1-208ENST00000544451 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
PCMTD1-208ENST00000544451 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
PCMTD1-208ENST00000544451 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
PCMTD1-208ENST00000544451 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
PCMTD1-208ENST00000544451 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
PCMTD1-208ENST00000544451 MT1MQ8N339 61 aa4.17□□□□□ -1.74
PCMTD1-208ENST00000544451 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
PCMTD1-208ENST00000544451 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
PCMTD1-208ENST00000544451 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
PCMTD1-208ENST00000544451 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
PCMTD1-208ENST00000544451 SPRR2EP22531 72 aa3.9□□□□□ -1.79
PCMTD1-208ENST00000544451 SPRR2BP35325 72 aa3.9□□□□□ -1.79
PCMTD1-208ENST00000544451 SPRR2AP35326 72 aa3.9□□□□□ -1.79
PCMTD1-208ENST00000544451 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
PCMTD1-208ENST00000544451 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
PCMTD1-208ENST00000544451 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
PCMTD1-208ENST00000544451 PRM1P04553 51 aa3.84□□□□□ -1.79
PCMTD1-208ENST00000544451 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
PCMTD1-208ENST00000544451 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
PCMTD1-208ENST00000544451 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
PCMTD1-208ENST00000544451 MT1AP04731 61 aa3.7□□□□□ -1.82
PCMTD1-208ENST00000544451 SPRR2DP22532 72 aa3.7□□□□□ -1.82
PCMTD1-208ENST00000544451 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
PCMTD1-208ENST00000544451 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
PCMTD1-208ENST00000544451 MT3P25713 68 aa3.5□□□□□ -1.85
PCMTD1-208ENST00000544451 MT4P47944 62 aa3.48□□□□□ -1.85
PCMTD1-208ENST00000544451 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
PCMTD1-208ENST00000544451 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
PCMTD1-208ENST00000544451 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
PCMTD1-208ENST00000544451 KRTAP5-9P26371 169 aa3.28□□□□□ -1.89
PCMTD1-208ENST00000544451 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
PCMTD1-208ENST00000544451 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
PCMTD1-208ENST00000544451 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
PCMTD1-208ENST00000544451 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
PCMTD1-208ENST00000544451 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
PCMTD1-208ENST00000544451 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
PCMTD1-208ENST00000544451 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
PCMTD1-208ENST00000544451 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
PCMTD1-208ENST00000544451 NEBP20929 6669 aa3.04□□□□□ -1.92
PCMTD1-208ENST00000544451 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
PCMTD1-208ENST00000544451 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
PCMTD1-208ENST00000544451 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
PCMTD1-208ENST00000544451 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
PCMTD1-208ENST00000544451 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
PCMTD1-208ENST00000544451 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
PCMTD1-208ENST00000544451 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
PCMTD1-208ENST00000544451 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
PCMTD1-208ENST00000544451 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
PCMTD1-208ENST00000544451 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
PCMTD1-208ENST00000544451 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
PCMTD1-208ENST00000544451 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
PCMTD1-208ENST00000544451 LCE1FQ5T754 118 aa2.55□□□□□ -2
PCMTD1-208ENST00000544451 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
PCMTD1-208ENST00000544451 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
PCMTD1-208ENST00000544451 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
PCMTD1-208ENST00000544451 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
PCMTD1-208ENST00000544451 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
PCMTD1-208ENST00000544451 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
PCMTD1-208ENST00000544451 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.05
PCMTD1-208ENST00000544451 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
PCMTD1-208ENST00000544451 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
PCMTD1-208ENST00000544451 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
PCMTD1-208ENST00000544451 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
PCMTD1-208ENST00000544451 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
PCMTD1-208ENST00000544451 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
PCMTD1-208ENST00000544451 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
PCMTD1-208ENST00000544451 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
PCMTD1-208ENST00000544451 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 218.8 ms