RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 A0A1B0GU69 56 aa0.63□□□□□ -2.31
TRAV11-201ENST00000539512 Q8IZM0 81 aa0.63□□□□□ -2.31
TRAV11-201ENST00000539512 ETDCA0A1B0GVM5 59 aa0.62□□□□□ -2.31
TRAV11-201ENST00000539512 PDCD5O14737 125 aa0.62□□□□□ -2.31
TRAV11-201ENST00000539512 MT1EP04732 61 aa0.62□□□□□ -2.31
TRAV11-201ENST00000539512 WFDC13Q8IUB5 93 aa0.62□□□□□ -2.31
TRAV11-201ENST00000539512 MT1MQ8N339 61 aa0.62□□□□□ -2.31
TRAV11-201ENST00000539512 RPL39LQ96EH5 51 aaKnown RBP0.62□□□□□ -2.31
TRAV11-201ENST00000539512 CRIP1P50238 77 aa0.61□□□□□ -2.31
TRAV11-201ENST00000539512 MT1GP13640 62 aa0.6□□□□□ -2.31
TRAV11-201ENST00000539512 KRTAP19-7Q3SYF9 63 aa0.6□□□□□ -2.31
TRAV11-201ENST00000539512 ALKAL2Q6UX46 152 aa0.6□□□□□ -2.31
TRAV11-201ENST00000539512 I3L3M4 83 aa0.59□□□□□ -2.31
TRAV11-201ENST00000539512 FCER1GP30273 86 aa0.58□□□□□ -2.32
TRAV11-201ENST00000539512 H1FX-AS1Q4G0G2 97 aa0.58□□□□□ -2.32
TRAV11-201ENST00000539512 DEFB105AQ8NG35 78 aa0.58□□□□□ -2.32
TRAV11-201ENST00000539512 IGLC3P0DOY3 106 aa0.57□□□□□ -2.32
TRAV11-201ENST00000539512 RPL39P62891 51 aaKnown RBP0.57□□□□□ -2.32
TRAV11-201ENST00000539512 Q5BKY6 102 aa0.56□□□□□ -2.32
TRAV11-201ENST00000539512 ST20Q9HBF5 79 aa0.56□□□□□ -2.32
TRAV11-201ENST00000539512 A0A087WXM4 84 aa0.55□□□□□ -2.32
TRAV11-201ENST00000539512 MYMXA0A1B0GTQ4 84 aa0.55□□□□□ -2.32
TRAV11-201ENST00000539512 SMIM31A0A1B0GVY4 71 aa0.55□□□□□ -2.32
TRAV11-201ENST00000539512 KRTAP6-2Q3LI66 62 aa0.55□□□□□ -2.32
TRAV11-201ENST00000539512 LINC00643Q86TS7 51 aa0.55□□□□□ -2.32
TRAV11-201ENST00000539512 K7EQZ3 153 aa0.54□□□□□ -2.32
TRAV11-201ENST00000539512 SPRR1AP35321 89 aa0.54□□□□□ -2.32
TRAV11-201ENST00000539512 KRTAP19-5Q3LI72 72 aa0.54□□□□□ -2.32
TRAV11-201ENST00000539512 MT1LQ93083 61 aa0.54□□□□□ -2.32
TRAV11-201ENST00000539512 KCNQ1DNQ9H478 68 aa0.54□□□□□ -2.32
TRAV11-201ENST00000539512 CDKN2A-AS1Q9UH64 79 aa0.54□□□□□ -2.32
TRAV11-201ENST00000539512 KANTRA0A1W2PQU2 76 aa0.53□□□□□ -2.32
TRAV11-201ENST00000539512 ADIRFQ15847 76 aa0.53□□□□□ -2.32
TRAV11-201ENST00000539512 CRIPTQ9P021 101 aa0.53□□□□□ -2.32
TRAV11-201ENST00000539512 A0A1B0GUT8 65 aa0.52□□□□□ -2.33
TRAV11-201ENST00000539512 ACYP1P07311 99 aa0.52□□□□□ -2.33
TRAV11-201ENST00000539512 POLR2KP53803 58 aaKnown RBP0.52□□□□□ -2.33
TRAV11-201ENST00000539512 LINC00158P58513 81 aa0.52□□□□□ -2.33
TRAV11-201ENST00000539512 IFI27P40305 119 aaPredicted RBP0.51□□□□□ -2.33
TRAV11-201ENST00000539512 COX8AP10176 69 aa0.5□□□□□ -2.33
TRAV11-201ENST00000539512 SPRR1BP22528 89 aa0.5□□□□□ -2.33
TRAV11-201ENST00000539512 SMIM2Q9BVW6 85 aa0.5□□□□□ -2.33
TRAV11-201ENST00000539512 S4R3F8 94 aa0.5□□□□□ -2.33
TRAV11-201ENST00000539512 KRTAP6-1Q3LI64 71 aa0.49□□□□□ -2.33
TRAV11-201ENST00000539512 TMEM167BQ9NRX6 74 aa0.49□□□□□ -2.33
TRAV11-201ENST00000539512 H3BUT2 72 aa0.47□□□□□ -2.33
TRAV11-201ENST00000539512 SMIM13P0DJ93 91 aa0.47□□□□□ -2.33
TRAV11-201ENST00000539512 COX7BP24311 80 aa0.46□□□□□ -2.34
TRAV11-201ENST00000539512 M0QZ58 72 aa0.45□□□□□ -2.34
TRAV11-201ENST00000539512 BVES-AS1Q5T3Y7 98 aa0.45□□□□□ -2.34
TRAV11-201ENST00000539512 MRPL34Q9BQ48 92 aaKnown RBP0.44□□□□□ -2.34
TRAV11-201ENST00000539512 MT1AP04731 61 aa0.43□□□□□ -2.34
TRAV11-201ENST00000539512 C3orf79P0CE67 100 aa0.43□□□□□ -2.34
TRAV11-201ENST00000539512 TOMM5Q8N4H5 51 aa0.43□□□□□ -2.34
TRAV11-201ENST00000539512 IGLV5-48A0A075B6I7 105 aa0.42□□□□□ -2.34
TRAV11-201ENST00000539512 IGIPA6NJ69 53 aa0.42□□□□□ -2.34
TRAV11-201ENST00000539512 NDUFB1O75438 58 aa0.41□□□□□ -2.34
TRAV11-201ENST00000539512 SERF2P84101 59 aa0.39□□□□□ -2.35
TRAV11-201ENST00000539512 ATP5EP2Q5VTU8 51 aa0.39□□□□□ -2.35
TRAV11-201ENST00000539512 C18orf32Q8TCD1 76 aa0.39□□□□□ -2.35
TRAV11-201ENST00000539512 GNG13Q9P2W3 67 aa0.39□□□□□ -2.35
TRAV11-201ENST00000539512 UMAD1C9J7I0 102 aa0.37□□□□□ -2.35
TRAV11-201ENST00000539512 LINC01546A6NGU7 62 aa0.35□□□□□ -2.35
TRAV11-201ENST00000539512 NREPQ16612 68 aa0.35□□□□□ -2.35
TRAV11-201ENST00000539512 LINC00308Q8TCZ7 52 aa0.32□□□□□ -2.36
TRAV11-201ENST00000539512 K7EMI3 77 aa0.3□□□□□ -2.36
TRAV11-201ENST00000539512 PRM1P04553 51 aa0.3□□□□□ -2.36
TRAV11-201ENST00000539512 SMCO4Q9NRQ5 59 aa0.3□□□□□ -2.36
TRAV11-201ENST00000539512 SMIM27A0A1W2PRY6 76 aa0.29□□□□□ -2.36
TRAV11-201ENST00000539512 MMP24-AS1A0A0U1RRL7 71 aa0.28□□□□□ -2.36
TRAV11-201ENST00000539512 LINC01549A6NIU2 74 aa0.26□□□□□ -2.37
TRAV11-201ENST00000539512 TNP1P09430 55 aa0.22□□□□□ -2.37
TRAV11-201ENST00000539512 PLNP26678 52 aa0.22□□□□□ -2.37
TRAV11-201ENST00000539512 ATXN8Q156A1 80 aa0.19□□□□□ -2.38
TRAV11-201ENST00000539512 S100ZQ8WXG8 99 aa0.19□□□□□ -2.38
TRAV11-201ENST00000539512 UBL5Q9BZL1 73 aa0.18□□□□□ -2.38
TRAV11-201ENST00000539512 H0YGX0 51 aa0.15□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 70.7 ms