RNA–Protein interactions for RNA: ENST00000532317.5

PICALM-219, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 1 (best) BASIC

Gene PICALM, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-219ENST00000532317 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
PICALM-219ENST00000532317 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
PICALM-219ENST00000532317 MT1EP04732 61 aa5.82□□□□□ -1.48
PICALM-219ENST00000532317 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
PICALM-219ENST00000532317 MT1LQ93083 61 aa5.81□□□□□ -1.48
PICALM-219ENST00000532317 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
PICALM-219ENST00000532317 MT1GP13640 62 aa5.73□□□□□ -1.49
PICALM-219ENST00000532317 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
PICALM-219ENST00000532317 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
PICALM-219ENST00000532317 LCE2DQ5TA82 110 aaPredicted RBP5.63□□□□□ -1.51
PICALM-219ENST00000532317 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
PICALM-219ENST00000532317 MT1MQ8N339 61 aa5.49□□□□□ -1.53
PICALM-219ENST00000532317 KRTAP9-2Q9BYQ4 174 aa5.39□□□□□ -1.55
PICALM-219ENST00000532317 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
PICALM-219ENST00000532317 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
PICALM-219ENST00000532317 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
PICALM-219ENST00000532317 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
PICALM-219ENST00000532317 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
PICALM-219ENST00000532317 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
PICALM-219ENST00000532317 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
PICALM-219ENST00000532317 SPRR2EP22531 72 aa5.18□□□□□ -1.58
PICALM-219ENST00000532317 SPRR2BP35325 72 aa5.18□□□□□ -1.58
PICALM-219ENST00000532317 SPRR2AP35326 72 aa5.18□□□□□ -1.58
PICALM-219ENST00000532317 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
PICALM-219ENST00000532317 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
PICALM-219ENST00000532317 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
PICALM-219ENST00000532317 SPRR2DP22532 72 aa4.92□□□□□ -1.62
PICALM-219ENST00000532317 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
PICALM-219ENST00000532317 MT1AP04731 61 aa4.79□□□□□ -1.64
PICALM-219ENST00000532317 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
PICALM-219ENST00000532317 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
PICALM-219ENST00000532317 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
PICALM-219ENST00000532317 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
PICALM-219ENST00000532317 PRM1P04553 51 aa4.64□□□□□ -1.67
PICALM-219ENST00000532317 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
PICALM-219ENST00000532317 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
PICALM-219ENST00000532317 MT4P47944 62 aa4.59□□□□□ -1.67
PICALM-219ENST00000532317 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
PICALM-219ENST00000532317 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
PICALM-219ENST00000532317 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
PICALM-219ENST00000532317 NEBP20929 6669 aa4.49□□□□□ -1.69
PICALM-219ENST00000532317 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
PICALM-219ENST00000532317 MT3P25713 68 aa4.4□□□□□ -1.7
PICALM-219ENST00000532317 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
PICALM-219ENST00000532317 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
PICALM-219ENST00000532317 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
PICALM-219ENST00000532317 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
PICALM-219ENST00000532317 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
PICALM-219ENST00000532317 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
PICALM-219ENST00000532317 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
PICALM-219ENST00000532317 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
PICALM-219ENST00000532317 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
PICALM-219ENST00000532317 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
PICALM-219ENST00000532317 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
PICALM-219ENST00000532317 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
PICALM-219ENST00000532317 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
PICALM-219ENST00000532317 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
PICALM-219ENST00000532317 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
PICALM-219ENST00000532317 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
PICALM-219ENST00000532317 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
PICALM-219ENST00000532317 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
PICALM-219ENST00000532317 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
PICALM-219ENST00000532317 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
PICALM-219ENST00000532317 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
PICALM-219ENST00000532317 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
PICALM-219ENST00000532317 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
PICALM-219ENST00000532317 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
PICALM-219ENST00000532317 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
PICALM-219ENST00000532317 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
PICALM-219ENST00000532317 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
PICALM-219ENST00000532317 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
PICALM-219ENST00000532317 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
PICALM-219ENST00000532317 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
PICALM-219ENST00000532317 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
PICALM-219ENST00000532317 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
PICALM-219ENST00000532317 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
PICALM-219ENST00000532317 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms