RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 TMEM167BQ9NRX6 74 aa1.41□□□□□ -2.18
NPM1-212ENST00000524204 SMIM27A0A1W2PRY6 76 aa1.39□□□□□ -2.19
NPM1-212ENST00000524204 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
NPM1-212ENST00000524204 KRTAP20-1Q3LI63 56 aa1.39□□□□□ -2.19
NPM1-212ENST00000524204 C6orf48Q9UBA6 75 aa1.39□□□□□ -2.19
NPM1-212ENST00000524204 KMT2DO14686 5537 aa1.38□□□□□ -2.19
NPM1-212ENST00000524204 SPRR1AP35321 89 aa1.38□□□□□ -2.19
NPM1-212ENST00000524204 KCNQ1DNQ9H478 68 aa1.38□□□□□ -2.19
NPM1-212ENST00000524204 M0R2T5 61 aa1.37□□□□□ -2.19
NPM1-212ENST00000524204 SPINK1P00995 79 aa1.37□□□□□ -2.19
NPM1-212ENST00000524204 MT2AP02795 61 aa1.37□□□□□ -2.19
NPM1-212ENST00000524204 SPRR1BP22528 89 aa1.37□□□□□ -2.19
NPM1-212ENST00000524204 POLR2KP53803 58 aaKnown RBP1.37□□□□□ -2.19
NPM1-212ENST00000524204 NDUFA1O15239 70 aa1.36□□□□□ -2.19
NPM1-212ENST00000524204 MT1FP04733 61 aa1.36□□□□□ -2.19
NPM1-212ENST00000524204 DEFB105AQ8NG35 78 aa1.36□□□□□ -2.19
NPM1-212ENST00000524204 CDKN2A-AS1Q9UH64 79 aa1.36□□□□□ -2.19
NPM1-212ENST00000524204 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
NPM1-212ENST00000524204 RPL39LQ96EH5 51 aaKnown RBP1.35□□□□□ -2.19
NPM1-212ENST00000524204 ETDCA0A1B0GVM5 59 aa1.34□□□□□ -2.19
NPM1-212ENST00000524204 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.19
NPM1-212ENST00000524204 FCER1GP30273 86 aa1.34□□□□□ -2.19
NPM1-212ENST00000524204 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.19
NPM1-212ENST00000524204 K7EMI3 77 aa1.32□□□□□ -2.2
NPM1-212ENST00000524204 SMIM2Q9BVW6 85 aa1.32□□□□□ -2.2
NPM1-212ENST00000524204 LINC01546A6NGU7 62 aa1.31□□□□□ -2.2
NPM1-212ENST00000524204 PLNP26678 52 aa1.31□□□□□ -2.2
NPM1-212ENST00000524204 PRLHP81277 87 aa1.31□□□□□ -2.2
NPM1-212ENST00000524204 H1FX-AS1Q4G0G2 97 aa1.31□□□□□ -2.2
NPM1-212ENST00000524204 RPL39P62891 51 aaKnown RBP1.3□□□□□ -2.2
NPM1-212ENST00000524204 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
NPM1-212ENST00000524204 KRTAP2-1Q9BYU5 128 aa1.29□□□□□ -2.2
NPM1-212ENST00000524204 C9orf92A6NGG3 77 aa1.27□□□□□ -2.21
NPM1-212ENST00000524204 IGIPA6NJ69 53 aa1.27□□□□□ -2.21
NPM1-212ENST00000524204 LINC00158P58513 81 aa1.26□□□□□ -2.21
NPM1-212ENST00000524204 WFDC13Q8IUB5 93 aa1.25□□□□□ -2.21
NPM1-212ENST00000524204 LINC00308Q8TCZ7 52 aa1.24□□□□□ -2.21
NPM1-212ENST00000524204 TOMM7Q9P0U1 55 aa1.24□□□□□ -2.21
NPM1-212ENST00000524204 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
NPM1-212ENST00000524204 MT1BP07438 61 aa1.22□□□□□ -2.21
NPM1-212ENST00000524204 H0YGX0 51 aa1.2□□□□□ -2.22
NPM1-212ENST00000524204 KRTAP19-8Q3LI54 63 aa1.2□□□□□ -2.22
NPM1-212ENST00000524204 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
NPM1-212ENST00000524204 SPRR2EP22531 72 aa1.19□□□□□ -2.22
NPM1-212ENST00000524204 SPRR2BP35325 72 aa1.19□□□□□ -2.22
NPM1-212ENST00000524204 SPRR2AP35326 72 aa1.19□□□□□ -2.22
NPM1-212ENST00000524204 IGLV5-48A0A075B6I7 105 aa1.17□□□□□ -2.22
NPM1-212ENST00000524204 SPRR2FQ96RM1 72 aa1.17□□□□□ -2.22
NPM1-212ENST00000524204 SPRR2GQ9BYE4 73 aa1.17□□□□□ -2.22
NPM1-212ENST00000524204 H0YAA0 97 aa1.16□□□□□ -2.22
NPM1-212ENST00000524204 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
NPM1-212ENST00000524204 SPRR2DP22532 72 aa1.15□□□□□ -2.23
NPM1-212ENST00000524204 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
NPM1-212ENST00000524204 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
NPM1-212ENST00000524204 DSTQ03001 7570 aaKnown RBP1.11□□□□□ -2.23
NPM1-212ENST00000524204 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
NPM1-212ENST00000524204 KRTAP8-1Q8IUC2 63 aa1.11□□□□□ -2.23
NPM1-212ENST00000524204 MT1XP80297 61 aa1.09□□□□□ -2.23
NPM1-212ENST00000524204 MMP24-AS1A0A0U1RRL7 71 aa1.06□□□□□ -2.24
NPM1-212ENST00000524204 MT4P47944 62 aa1.01□□□□□ -2.25
NPM1-212ENST00000524204 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
NPM1-212ENST00000524204 MUC5ACP98088 5654 aa0.99□□□□□ -2.25
NPM1-212ENST00000524204 MT1EP04732 61 aa0.98□□□□□ -2.25
NPM1-212ENST00000524204 MT1GP13640 62 aa0.96□□□□□ -2.26
NPM1-212ENST00000524204 KRTAP20-2Q3LI61 65 aa0.96□□□□□ -2.26
NPM1-212ENST00000524204 S4R3F8 94 aa0.95□□□□□ -2.26
NPM1-212ENST00000524204 MT1MQ8N339 61 aa0.93□□□□□ -2.26
NPM1-212ENST00000524204 MT1LQ93083 61 aa0.9□□□□□ -2.27
NPM1-212ENST00000524204 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
NPM1-212ENST00000524204 KRTAP19-5Q3LI72 72 aa0.87□□□□□ -2.27
NPM1-212ENST00000524204 M0QZ58 72 aa0.84□□□□□ -2.27
NPM1-212ENST00000524204 PRM1P04553 51 aa0.83□□□□□ -2.28
NPM1-212ENST00000524204 MT1AP04731 61 aa0.76□□□□□ -2.29
NPM1-212ENST00000524204 TNP1P09430 55 aa0.76□□□□□ -2.29
NPM1-212ENST00000524204 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
NPM1-212ENST00000524204 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
NPM1-212ENST00000524204 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
NPM1-212ENST00000524204 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 173 ms